Pseudomonas syringae pv. syringae B301D-R, PSSB301D_RS18390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae str. B301D-R B301D_Contig09, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGGCGACAACGCGGCCAAGGTCAAGCTGACGCTGGAAGACAACAGCGTCTACGCCCAGGAAGGCAAACTGGAGTTCTCCGAAGTATCGGTTGACCAGAC CACCGGCTCCGTGACCCTGCGTGCGGTGTTCCCGAACCCTGAACACCGTTTGCTGCCGGGCATGTTCGTTCATGCTCAATTGCAGGCTGGCGTCAATTCG AAGGCCATCCTGGCACCGCAGCAAGGTGTGACCCGCGACCTGAAAGGCACGCCGACCGCCATGGTCGTCAATCAGGACAACAAGGTTGAAATGCGTACGC TGGTGGCCAATCGCACCGTGGGCAGCGACTGGCTGATCGAAGACGGCCTGAAAGAAGGTGATCGCGTCATTACCGAAGGCCTGCAGTACGTCAAACCAGG CGCCGAAGTGAAAGTCGCCGAAGCGACCAACGTCAAAGGAGCAAACCCGGCACCTGCCCCGGCCACTGATAAAGCCGCAGGCAGCAAAGGGGAGTAACCC
DNA Sequence for Gene
>PSSB301D_RS18390
ATGTCGAAATTTTTTATTGATCGACCCATTTTTGCCTGGGTTATTGCCCTCGTGATCATGCTGGTCGGTGCGCTGTCGATTTCCAGCCTGCCGATCAACC AGTACCCGAGCATCGCACCGCCCGCCATCGGTATCCAGGTCACCTATCCGGGCGCGTCTGCCCAGACGGTGCAGGACACTGTGGTTCAGGTGATCGAGCA ACAGCTCAACGGTATCGATAACCTGCGTTATGTCAGCTCGGAAAGTAACTCCGACGGCAGCATGACCATCACTGCGACTTTCAATCAGGGCACCAACCCG GATACGGCGCAGGTTCAGGTGCAGAACAAGCTCAACCTCGCGACCCCGCTGCTGCCACAGGAAGTGCAGCAACAGGGTATCCGCGTCACCAAGGCAGTGA AGAACTTCCTGATGGTGATCGGTCTGGTGTCGGAAGACGGCAGCATGGGCAAGGAAGACCTGGCCAACTACATCGTGTCGAACATGCAGGATCCGATCTC GCGGACCTCCGGTGTGGGTGACTTCCAGGTGTTCGGTTCGCAGTACGCCATGCGTATCTGGCTGGACCCGGCCAAGCTGAACAACTTCCAGCTGACCCCG GTGGACGTGAAAGACGCGATCACCGCGCAAAACGTCCAGGTGTCGTCCGGCCAGTTGGGCGGCCTGCCATCGATCAGCGGTCAGCAACTGAACGCCACGA TCATCGGCAAGACCCGTCTGCAGACCGCCGAGCAGTTCGGCAACATCTTCCTCAAGGTCAACACCGACGGCTCGCAGGTTCGCCTGAAAGACGTCGCCAC GGTCGGCCTGGGCGCAGAGAACTACAGCACCGACTCGCAGTTCGACGGCAAACCGGCTTCCGGTCTGGCGATCAAGCTCGCCACCGGCGCCAACGCGCTG GACACCGCCAAGGCCATCCGCGCGACCGTTTCCTCGCTGGAGCCGTTCTTCCCGCCTGGCATGAAAGTCGTTTATCCGTATGACACGACACCGGTGGTCA GCGAATCGATCAACGGCGTGGTGCACACCCTGATCGAAGCGATCGTGCTGGTGTTCCTGGTGATGTACCTGTTCCTGCAGAACTTCCGCGCAACCATCAT CACCACGATGACGGTTCCGGTGGTCTTGCTGGGTACGTTCGGCATCCTCGCGGCCTTCGGTTTCACCATCAACACCCTGACCATGTTCGGTATGGTGCTG GCCATCGGCTTGCTGGTGGACGATGCGATTGTGGTGGTGGAAAACGTCGAGCGGGTCATGGAGGAGGAAAAGCTCTCCCCGCGCGACGCCACGATCAAAT CCATGACACAGATTCAGGGTGCACTGGTCGGTATTGCCCTGGTGCTGTCGGCGGTTCTGTTGCCGATGGCGTTCTTCGGCGGCTCCACCGGGGTGATCTA CAAGCAGTTCTCGATCACCATCGTCTCGGCCATGGCCCTGTCGGTCGTGGTTGCGCTGATCTTTACCCCGGCGCTGTGCGCCACCATGCTCAAGCCCATC GATCACGAGAAGCACGGACAACCGAAACGGGGTTTCTTCGGCTGGTTCAACCGCACCTTCGACCGCAGCGTTCTGAGTTACGAGCGCGGCGTCGGCAACA TGCTCAAGCACAAGTGGCCTGCGTATCTGGGTTACATACTGATCTGCGCGGGCATGGTGTTCATGTTCATGCGTATTCCGGCTGCGTTCCTGCCGGAAGA AGACCAGGGCGTTATCTTCGCCCAGATCCAGACACCGGCCGGCTCCTCGACCGAGCGCACGCAGGAAGTCATCGATCAGATGCGTGAGTACCTGCTGACC AAGGAAAGCGGCGCGGTGAAGTCGGTGTTCTCGGTAAACGGCTTCAACTTCGCGGGCCGCGGTCAAAGCTCGGCGATTGCGTTCGTGATGCTCAAGCCGT GGGAAGAGCGTGATTCCAACAACAGCGTTTTCGAACTGGCCAAGCGGGCTCAAGGCTATTTCTTCAGCCTGCGCGACGCGATGGTGTTTGCGGTCGTCCC GCCTTCGGTACTCGAACTGGGTAACGCCACAGGCTTCGACGTCTACCTGCAGGATCAGGGCGGCGTGGGTCACGACAAGCTGATGGAAGCGCGTAACCAG TTCCTCGGCATGGCTGCACAGAGCAAGATTCTGGCGGGCGTGCGTCCGAACGGTCTGAACGACGAACCGCAATACCAGTTGATCATCGACGACGAGCGCG CCAGTGCATTGGGCATCACCCTGTCGGACATCAACAACACCCTGTCCATCGCGTTGGGTGGCAGCTACGTCAACGACTTCATCGACCGTGGCCGTGTGAA GAAGGTGTACATCCAGGGCGATGCAGGTGCGCGTATGACGCCTGAAGACCTGAAGAAATGGTACGTACGCAACAGCGCGGGCGAGATGGTGCCGTTCTCG GCCTTCGCCAGCGGCAAATGGTCCTACGGCTCGCCGAAACTGTCACGCTACAACGGCGTGGCGGCAGAGGAAGTACTCGGTACTCCAGCCCCTGGCTACA GCAGCGGCGACGCGATGAACGAAGTCGAGGCGCTGGCCAAGAAGCTGCCGCAAGGTATCGGCATCTCGTGGACCGGTCTGTCCTACGAGGAACGCCTGTC CGGTTCACAGGCCCCTGCCCTGTATGCCCTGTCGCTGCTGGTCGTGTTCCTCTGTCTGGCGGCATTGTATGAAAGCTGGTCGATTCCGATCGCGGTCATC CTCGTGGTGCCACTGGGGGTTATCGGTGCACTGATGGCAACCAGCCTGCGCGGTCTGTCCAACGACGTGTTCTTCCAGGTCGGGTTGCTGGTGACGGTGG GTCTGGCGGCGAAAAACGCCATTCTGATCGTCGAGTTCGCCAAAGAGCTTCACGAACAGGGCAAGAGCCTGGTCGACGCGGCGATCGAGGCCTGCCGCAT GCGTCTGCGCCCGATCATCATGACCTCCATGGCCTTCATCCTTGGCGTTGTGCCGCTGGCGATTTCCTCGGGCGCAGGTTCGGGTAGTCAGCATTCGATC GGTACTGGCGTAATTGGCGGTATGATCACCGCAGTTATTCTGGCGATCTTCTGGGTGCCCCTGTTCTTCGTAACGGTTTCAGGGCTCTTCAAGAGCAAGC AGAAACATATTTCACACGATGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCATTGATCTCACTTGCAGTTACCGCGTTCATTCTCGGCGGCTGCTCTTTGATCCCCGATTACAAGCAGCCGCAAGCACCGGTCGCGGCACAATA TCCGCAAGGGCCGGCGTACTCGCCGGTCGAAGGCGCCAAAATGGCCGCCGCGGAGCAAGGCTGGCGGCACTTCTTCAATGACCCGGCGCTGCAACAGCTG ATTCAGACTGCACTGCTCAACAACCGTGACCTGCGGGTTGCGGCGCTGAACATCGACGCCTACCGCGCCCAGTACCGTATCCAGCGCTCGGACCTGTTCC CTGCTGTTTCGGCCACCGGTAGCGGCTCACGTCAGCGCGTGCCGGGTGATCAGTCGCAGACCGGTCAGCCAGGCATCACCAGCAGCTACTCGGCCACCCT GGGTGTCAGCTCGTACGAGCTGGACCTCTTCGGCCGGGTCCGCAGCCTCAGCGAGCAGGCGCTGGAGACCTACTTCGCCAGCGAGGAAGCGCGTCGCAGC
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSISSLPINQYPSIAPPAIGIQVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFNQGTNP DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVIGLVSEDGSMGKEDLANYIVSNMQDPISRTSGVGDFQVFGSQYAMRIWLDPAKLNNFQLTP VDVKDAITAQNVQVSSGQLGGLPSISGQQLNATIIGKTRLQTAEQFGNIFLKVNTDGSQVRLKDVATVGLGAENYSTDSQFDGKPASGLAIKLATGANAL DTAKAIRATVSSLEPFFPPGMKVVYPYDTTPVVSESINGVVHTLIEAIVLVFLVMYLFLQNFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMVL AIGLLVDDAIVVVENVERVMEEEKLSPRDATIKSMTQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMALSVVVALIFTPALCATMLKPI DHEKHGQPKRGFFGWFNRTFDRSVLSYERGVGNMLKHKWPAYLGYILICAGMVFMFMRIPAAFLPEEDQGVIFAQIQTPAGSSTERTQEVIDQMREYLLT KESGAVKSVFSVNGFNFAGRGQSSAIAFVMLKPWEERDSNNSVFELAKRAQGYFFSLRDAMVFAVVPPSVLELGNATGFDVYLQDQGGVGHDKLMEARNQ FLGMAAQSKILAGVRPNGLNDEPQYQLIIDDERASALGITLSDINNTLSIALGGSYVNDFIDRGRVKKVYIQGDAGARMTPEDLKKWYVRNSAGEMVPFS AFASGKWSYGSPKLSRYNGVAAEEVLGTPAPGYSSGDAMNEVEALAKKLPQGIGISWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPIAVI LVVPLGVIGALMATSLRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQGKSLVDAAIEACRMRLRPIIMTSMAFILGVVPLAISSGAGSGSQHSI GTGVIGGMITAVILAIFWVPLFFVTVSGLFKSKQKHISHDEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site