Pseudomonas syringae pv. syringae B301D-R, PSSB301D_RS24780

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. syringae str. B301D-R B301D_Contig01, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGATGCAATCGGACCTGGCGAAGATCGGTATCAAGATCGACATCCGTGTCATGGAATGGGGTGAAATGCTCAAACGCGCCAAGAATGGCGAACATGACA TGGTGTCTGCCGGCTGGGCAGGCGACAATGGCGACCCTGATAACTTCCTGACTCCGATGCTGAGCTGCGAAGCGGCGAAAAACGGCGAGAACTACGCCCG CTGGTGCAACGCCGATTTCCAGAAGCTGATCGATCAGGCGCGTGAAACAGTGAACCCCGAGGAACGCGCTGCGCTCTATGAACAGGCCCAGGCAATATTC AACAAGGATCAGCCGTGGATCAGCATGGCTCACACCCGAATGTTCACCGCTATGCGTAAAAATGTGGAGGGCTACCAAATCAGCCCGCTCACAACCAACA ACTTCGCCACTACCCAGGTGAAGTAGAAAAATAATCCGGCGAGCTCATAACCCGAGACTCGCCGGAGCACGCCTAACCGGCTGATGAGGTACACACCAAG
DNA Sequence for Gene
>PSSB301D_RS24780
ATGTTTAGTTTTATCGCCCGCCGAGTGGGGTTGCTGATACCCACTTTCTTCGGCATCACCTTATTGACCTTCGCCCTGATTCGTCTGATTCCGGGCGATC CGGTCGAAGTCATGATGGGTGAGCGCCGTGTCGATCCGGAAATGCACGCTCAGGCCATGGAGCGTCTGGGTCTGAACAAACCCCTCTACGCCCAGTACAT CGATTACATCGGCAAGCTCGCCCAGGGCGACCTCGGTGAATCGCTGCGTACGCGCACCAGTGTCTGGTCCGAATTCACTTCGCTGTTCCCGGCAACCCTG GAGTTGTCGCTGGCGGCGCTGATTTTCGCGGGTATTCTCGGCCTGCTGGCCGGGGTGATCGCCGCACTCAAGCGAGGGTCCCTGTTCGACCATGGGGTCA TGGGGATTTCCCTCGCCGGTTATTCCATGCCGATCTTCTGGTGGGGCCTGATCCTCATCATGTTCTTCTCGGTAACGCTGGGCTGGACCCCGGTTTCCGG GCGCATCGACCTGCTGTACGACATTCCGCCGGTCACCGGCTTCATGCTGATCGACACGCTGCTCAGTGACGAACAGGGTTCGTTCCTCGATGCCCTGCAC CACATGATTCTGCCGGCCATCGTACTGGGCACCATCCCGCTCGCGGTGATCGCCCGGATGACTCGCTCGTCGATGCTCGAAGTGCTGCGTGAAGACTACG TGCGTACCGCCAGAGCCAAAGGCCTGTCGCCTGCCCGTGTGGTATTCGTTCATGGCCTGCGCAATGCGCTGATTCCGGTACTGACCGTGTTCGGTCTGCA AATCGGTACCTTGCTGGCCGGTGCGGTACTGACCGAAACGATCTTCTCCTGGCCGGGTATCGGCAAGTGGTTGATCGAAGCCATTGGCGCCCGGGACTAC CCGGTCGTGCAAAACGGCATTCTGCTGATCGCCTGTCTGGTGATCCTGGTCAATTTCGTGGTGGATATCCTCTACGGCTTTGCCAACCCACGCATTCGTC ACCAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCATCGATATGAGCACCCCTACTCCTGCGGTAGCAGTCGATCAAAGCCTGCTTTACCCATCCCCGTACAAAGAATTCTGGCAAGCCTTCTCGAAAAAC AAAGGCGCGGTTGCCGGCCTGCTGTTCATGATCCTGATCGTGTTCTGCGCCCTGTTCGCGCCCTGGGTTGCACCCCATGACCCGAGCGAGCAATACCGCG ACTTCCTGCTGACGCCTCCGGTGTGGCTCGAAGGCGGCCAATGGCAATTCATCCTCGGTACCGACGAACTGGGCCGCGATCTGCTGTCACGTCTGATCCA GGGCTCGCGCCTGTCGCTGCTGATCGGTCTGGCATCGGTGGTCATGTCGCTGATCCCCGGCATTCTGCTGGGCCTGCTGGCGGGCTTCTTCCCTCGCGTG CTCGGCCCTTCGGTGATGCGCCTGATGGACATCATGCTCGCCCTGCCTTCGCTGCTGCTGGCTGTGGCCATCGTGGCGATCCTCGGCCCAGGCTTGATCA
Amino Acid Sequence
>peptide ABC transporter permease
MFSFIARRVGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYIDYIGKLAQGDLGESLRTRTSVWSEFTSLFPATL ELSLAALIFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVTLGWTPVSGRIDLLYDIPPVTGFMLIDTLLSDEQGSFLDALH HMILPAIVLGTIPLAVIARMTRSSMLEVLREDYVRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQIGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site