Pseudomonas putida S16, PPS_2505

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S16 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCCGCTGTCGTTCGTCACCGGCCTGACCGGTTGCATCATCCTGCTGTGCCTGGCGCTGTTCAGCATCAACATGGCCAGTGCCACCGCCTGGATGATCGTC AACACCATCGTCGACAGCCAGCGCGTGGCCTCGTTTGGCTCGATCCAGAACTTCGGCGGCTACATTGCCGGCTCGGTGGCGCCGATCGTCACCGGCTTCA GCATCCAGTATTCGGGCTCGTTCACCACGGCGTTCATGATCAGTGCGGTAGTGGCGCTGTGTTCGGCGGTGGCCTACTTCCTGCTGCTGCAGGCGCCGAT TGGCAGTGCCAAGGTCAAGGCGGCGGAGATAATCGGGGCGACGGAACAGGTGTGAATTCCGGGGGGGCGCTTTGCGCCCCAATCGCGACGCAAGGCAGCC CCCAAGCCGATAGCCAATTGTTGAGCGACCCACGGCACTTGCCAGGCATACTGGTCTGTATGTATAACCAGTATCCATTCCAGCCGCCTGACCCCAGCCC
DNA Sequence for Gene
>PPS_2505
GTGATCGCCCATTCCGTCGACGACCCGTTCTACTACCTGCACAACTTCCGCCAGGTGCTGCTGTGGGTCGAACAGCGCTACGAAGACCTGCTCGACGACC AGGAACTCGCTTTCATCCACACCTTCAGCCAACTGGACGCCCCGGCGCAGGCCCTGATGGTGCGCATGGTCATGCGCAAGGGCGAGCTGTTTCGCAGCGA TCGGCTCGACTATGCCGAAATCGGCGATACCGGGCAGGCCCTGCAACCGTTGCTGGCCCTCGGCTGGGTACGGGAGCCCGCGCAACTGGAATTGGAGCAA CTGTTCGCCCTGTTGCGCAAGGACGAATTTGCCCGTTGTTTTGCCCCACAGCTGAGCCGCCCTCGCGCCGCCAAGCATGACCTGCTTGCACAGCTGCAAC CTCTGGGCCTGCAAGCCCGTTCACTGGCCGAGTGGTTCCCGGACAGCGGCATGCGCATCCTCCATTGGTGCCTGCAACCCTTGTGCGACCGCATGCGCCT GCTGTTCTTCGGCAACCTGTACCAGGACTGGTCGGACTTCGTCCTCGCCGACCTTGGCTTGTTGCGCTACGAACAGGTGCCGTTCAGCCCCGATTCGCGT GCCCTTCAACAACGTGCCGAAGTCGACCTGGCCATGGCCTTGCACCGTTGCGCCGAGCGCCTTGAGCAAGGCGACGACCCGCTGTCGATCCTGGCAGCCA TGCAGGGCCTGCACAGCGACAACCCATGGCTGGCCCGGCGCCATGCGCGCCTGCAATTCGCCTTGGGCCAGCAATGCGAGCGTCTGGGCGACTGGGCGCA GGCCATGGCTGTGTACACGCAGTGCAGCCACGCCCAGGCGCGCATCCGCCAGGTGCGGGTGCTGGAGCGCAGCGAGCAGTGGCACCAAGCCCATGCGCTG GCGCTGCAACTGGCCGCGGCACCGGCCAACGCCCTGGAAGTGCAGGCGCTGGAACGCATGTTGCCACGCCTGGCACGCAAGCTCGGTGGCCCGCCACAGC GGCGCCAGCGTGTCGCGCCGCTGGAACTGATCGAGCTGGAGCTGCCCCGGGAACAGGCAGCGCTGGGCGTGGAGGAGGCGGTACGCCAGTACCTGGCCGA AGCCGGTGGGCCGGTGCATTACGTGGAGAACACGCTGTTCAACAGCCTGTTCGGCCTGCTGTGCTGGGAGGCGATCTTCGCCCCGGTGCCTGGCGCCTTC TTCAACCCATTCCAGGCCGCCCCGCAGGACCTGCACGACGGTGATTTCCAGCAACGCCGCAGTACTCTGTTCGACCGTTGCCTGGGGCGACTCGACGATG GCAGCCATCACAGCGCGATTCTCGACTGCTACACCGCCAAGCAAGGCCTGCAGTCGCCGTTCGTGTTCTGGTCCGTGCTCAGCGAAGAGTTGCTTGAGCA AGCCCTGGCCTGCCTGCCGGCGGCCCATTTGAAACAGTGCTTCCTGCGCCTGCTGCAGGACATCCGAAACAACCGCGCCGGCATGCCCGACCTGATCCAG TTCTGGCCCGAACAGGGCCGCTACCGCATGGTCGAGGTCAAGGGGCCCGGCGACCGCCTGCAGGACAACCAGCTGCGCTGGCTGGAGTTCTGCCGGGCGC ACGGTTTGCCTGTCGCGGTGTGCCATGTACGCTGGAGCGAAACGCCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTATAGCGTGGCGGTACGGGCCTTGTGCGAGTTCAGCGCCAAGGTAGGCGACCTGGACCTGCGCTTCACCCCATCACCCACCGCTCAGGAGGGGATCGA AGGGCATCGGCGCGTGGTGGCGCGACGCGCCGCGGGCTACGAGTCGGAAATTACCCTCGAAGGCCAGTTCGAAACCCTGAAAGTGCGTGGCCGCGCCGAC GGTTACGACCCCACCTGCAACCGCCTGGAAGAGATCAAGACCCACCGTGGCGACCTGTCGCGCCAGCCGGCCAACCATCGCCAGTTGCACTGGGCGCAGG CCAAGGTCTATGGCTGGTTGATGTGCCAGGCTCGGCAACTGCCGGACATCGAGGTGGCGCTGGTGTACCTGGACGTGGACAGCGATGGCCAGACGCTGAT CAGTGAACACTGCACGGCAGCCGAACTGCAGGCCTTCTTCGAAACCCAGTGCCAACGCTTTCTGGCTTGGGCACAAGAGCAGGAGCAGCGCCTGGCCGAG
Amino Acid Sequence
>VRR-NUC domain-containing protein
MIAHSVDDPFYYLHNFRQVLLWVEQRYEDLLDDQELAFIHTFSQLDAPAQALMVRMVMRKGELFRSDRLDYAEIGDTGQALQPLLALGWVREPAQLELEQ LFALLRKDEFARCFAPQLSRPRAAKHDLLAQLQPLGLQARSLAEWFPDSGMRILHWCLQPLCDRMRLLFFGNLYQDWSDFVLADLGLLRYEQVPFSPDSR ALQQRAEVDLAMALHRCAERLEQGDDPLSILAAMQGLHSDNPWLARRHARLQFALGQQCERLGDWAQAMAVYTQCSHAQARIRQVRVLERSEQWHQAHAL ALQLAAAPANALEVQALERMLPRLARKLGGPPQRRQRVAPLELIELELPREQAALGVEEAVRQYLAEAGGPVHYVENTLFNSLFGLLCWEAIFAPVPGAF FNPFQAAPQDLHDGDFQQRRSTLFDRCLGRLDDGSHHSAILDCYTAKQGLQSPFVFWSVLSEELLEQALACLPAAHLKQCFLRLLQDIRNNRAGMPDLIQ FWPEQGRYRMVEVKGPGDRLQDNQLRWLEFCRAHGLPVAVCHVRWSETP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site