Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS10270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. actinidiae ICMP 9617 chromosome Chr, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGCCGTTCCAGATTTCCGGCCAGCCGAAGATCGTCAGTGCCGCGCCAGAGAGCCTGCCGCGGGCGGTTTTCACCAGGTCGAACTGCCCCGAACCGTCCT TGTCGGCCTTGTTGCCCTCGCTGCCGAATTTCATCGGTACGGTGATGTGGCTGTCGAAGGAAATGATCCGCTCTTGCAGGTCGTCGGCCTGCTTCATGAC CTTGACCGGGTAACCGGCAGGCGACCAGTAATTCCAGGCCAGAAAACCCGCGCCTGCACTGATGGCCAGAGCCAGCGGCAGGCCGATGAAGAGAGCCTTT TTCCAACGCGGTCTTGTCATTTCCGTCTCGTTTGATTAACCGTGGCGCGGCCTGCAAGGGCCGTTGCTATCTGGTGGAGAACGAGCGGATGGGCGAAAAA TTTAGCGCAACGTGCTGTGTGCAGGCGTTGAGCTAAATTTGTCTGTCGGTTTTACGTTCTAGCTTGGATAACGGCGGTCTCGGGTTGGAACAGGTAGGCA
DNA Sequence for Gene
>A250_RS10270
ATGACGATTTCTCGACGAGGGTTCATGGCAGGGCTGGCGCTGACCGGCGCGGCGCTTCCGGCTGCTTATTACGCGCACCGCGAACTCACCCGAGTCGAGG AACCCGTGACGCCGGGCGAGGCCACGGCCGGGCCTGCGGACACCGCCACTCAGCGCCTGGCCGACAAGCTGCGTGGCGTGTGGACCCTGCGTTTCGAGGG CCGCGATGCCGGGCTGAGCGGAGCGCCGCTGCAAGGCCTGGAAATGTTTCTCGACATTGCCCCGCGTGGGCGCGGCCTGCGCGGCTATATCGACACGGCT GAGCAGTTGCGCGGCGATGGCATGCCACGCTTTCGGGTGATCGGCGACCTGCAACCGGCCAATGCCGCGAAACTGTATCTGCGGGTCATGGATGGGCATG CGGGCAATGATCCGCACAGCGACACCCCGGATTATGAATTCAGCCTGACCCTCGATGAAGTCTGGGGCGCGTTCGGCAATGCCGGCAGCGGCACGCTCAG CGGGCGTGTCGAGCGACTGGATCGGCCATTGGCCCTGCCGGAGCTGGAAAACCGCCTGATCGCCATCAAACAGGTGTTTCCCGAGGCGCGTGAGCGAGTC GGCCTGAGTCCGCCGTTTCTCGCCTGGCTGGTTTCAAAGGAACACCGCCTGTTTCACCAACTCTGGCATGCGTCTCGGGATAAATGGCACAAGCTGCCCG AAGACAAGCGCGATGCCCTGCGCGGCATCGGCTGGCAGCCGGGGCCCCGCGACAAAGAACGTGATGCCCGTGGTCCGCACAAGGACCGCAACGGTTCGGG TGAAGACTTCTTTTACATGCACCGGCACATGCTGATTCAGGCGCGCAAGATTCAAGACCTGCCGTCGTGGCCGCGCTTTCCGTTGCCGCAGCCTGAGCTT GAGCGCGACCGGCTGGGCTTTGCCCGCTACTTCGACAATCACGACGGCTGCGCGTTGCCGCCCAACTGGCTGGCGCAGGGCGACGAGGAATACACGCAAT TGGTCAGTGACATCAAAAGCCACGAGACCTACCACACGCATTTCGAGGTGTGGGAATCGCAGTACCGCGATCCGCGTTTTCTGTCGAAGCTGACGTTGGG GCAGTTCGGTTCGCAGGTCGAACTGGAGCTGCACGACTGGCTGCACATGCGCTGGGCCTCGGTGGCCCGCGACCCCGCCAACGGCCAGCCGGTGCCCATG GCACGCCGCTCGGATGACTTCGCCGAGCGCTGGTTCGAGCCGGAAAACGACTTTCTCGCCGACCCGTTCTCGTCCCATGTAAACCCGGTGTTCTGGATGT TTCACGGCTGGATCGACGACCGCATCGACGACTGGTTCCGCGCCCACGAGCGTTTTCATCCGGGCGAAGTGAAACGCCTGGAAGTCAACGGCGTGCCATG GTTCGCGCCAGGCCGCTGGGTTGAAGTCAGCGACCCGTGGCTGGGCCCGGAAACCCACGGTTGCAGCACCGTGCCGGGTCAGGCTGCAGGCACGACCATG GAAATGGACCCGGAAGTGATGAAGCTTGCGCTGCGGATTACCTTTGCGGCGGATGACAAATTGAGCAACCTGTTACGCCGTGTGCCGCGCAGACCTTGGT ATGCAAGGAATCTGTTGCCGGACAGATGGTTTTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGAACGGCATGCCGACGCAGAGCGTCGCACGATAGTTGAGATTATCGTTCCCTACGCTCCAGTGGAATTCAGCTCTCGACGCTCTGCGTCGCAAGAGGAC GCGGAGCGTCCAGAAAGGCATGCGACGCAGAGCGTCGCACGATAGTTGGGATTATCGTTCCCTACGCTCCAGTGGAATGCAGCTCTCGACGCTCTGCGTC GCACGATAGTGGATCGTGCGCTCAGCGCACCTGCCAACCCCCGCCCAGCGCTTTATACAGCGCAATGCTCGCCTGCACCCTTGCCAACCGTAACTGCACG CTCACATCCTGGGCCAGGTACAGCGTGCGTTGGGTTTCCAGCACGGTCAGTAAATCCTCGGCGCCGGCTTCGTAACGGCTCTGGGCGATGCGGAAGGCGA TTTGCGCTTGTTTAAGCTCCTCTTCGTGCCAGTAGCGTTGCTGGTCCAGGCCGCTGATGCTGTTCAGGGCTTTTTCGACGTCGGCGAAGCTGTTGATGAT
Amino Acid Sequence
>chromophore maturation protein PvdP
MTISRRGFMAGLALTGAALPAAYYAHRELTRVEEPVTPGEATAGPADTATQRLADKLRGVWTLRFEGRDAGLSGAPLQGLEMFLDIAPRGRGLRGYIDTA EQLRGDGMPRFRVIGDLQPANAAKLYLRVMDGHAGNDPHSDTPDYEFSLTLDEVWGAFGNAGSGTLSGRVERLDRPLALPELENRLIAIKQVFPEARERV GLSPPFLAWLVSKEHRLFHQLWHASRDKWHKLPEDKRDALRGIGWQPGPRDKERDARGPHKDRNGSGEDFFYMHRHMLIQARKIQDLPSWPRFPLPQPEL ERDRLGFARYFDNHDGCALPPNWLAQGDEEYTQLVSDIKSHETYHTHFEVWESQYRDPRFLSKLTLGQFGSQVELELHDWLHMRWASVARDPANGQPVPM ARRSDDFAERWFEPENDFLADPFSSHVNPVFWMFHGWIDDRIDDWFRAHERFHPGEVKRLEVNGVPWFAPGRWVEVSDPWLGPETHGCSTVPGQAAGTTM EMDPEVMKLALRITFAADDKLSNLLRRVPRRPWYARNLLPDRWF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site