Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS13670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. actinidiae ICMP 9617 chromosome Chr, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCATGCTGCGGCCGGTACGCACGAACAACGGGTCGTCGAACAGCCCGCGCAGGCGAGAAAGTGCGGCGCTGATGGCTGGCTGGCCAAGAAACAGTTTTCC CGCCGCACGCGTGACGCTGCGCTCATGCATCAGGGTTTCGAAGACGATGAGCAGATTGAGGTCGACGCGACGCAGGTCGTTACGATTCATGCGGAATATC TCGGGCCATTTGTCGGTTGAGGACGTGAGCAGGGTGCGATAGTACGAGCAAATGCGGGTCCGGCGCAGGGAAAATTAATGGCGTGGGCGCGGAATGTCCA CATGGCTTGCAATGTCTGGTCGACATGCGAACAATGGCGGCCATTATGCATCGCGGCGTCCAGACGCTGTCTGGCCGCGACATGTAGCTCACAGGACACA ATCGATGACAGGCATGTCGACTATCAATAGCCACCGATAGTGTTCCCGGCAATGCCCGGATAAAGTTTGTGGCATCAAGGTTTACCAGGCGAGGTTCTAA
|
|
| DNA Sequence for Gene |
>A250_RS13670
ATGTCCCGCACGATCCGTTTTCACCAGTTCGGCCCGGCCGAGGTGCTCAAGCTTGAAGAGCAGCCCGTCGCGTCGCCTGCACCCGGCGAGGTGCAGGTTC GCGTCCAGGCTATCGGTGTCAGCTGGTACGACGTTCTATGGCGGCAAAACCTCGCCTCTACCCAGGCGCGGCTGCCTGCCGGGCTGGGTTACGAGATGGC TGGCGTGGTCTCTGCACTGGGCGACGGGGTCGATGATCTGCAGGTGGGTGACAAGGTCGCCAGCTTTCCTGCGGCCGATGCCAACCAGCATCCGGTTTAT GGCGAATGCATCGTCATGCCGCGCCTGGCGTTGACCCGCTACCCGGACGTGCTGACGCCTGTCGAAGCCAGTGTGCATTACACGCCGTATCTGGTGGCGT ACTTTGCCTACGTCGATCTGGCGCGCATCAAGACTGGCCAGACGGTGCTGGTTACCGACGCCAGCCATTGCTCCGGTCCTGCGTTCGTGCAACTGGGCAA GGCGCTGGGTGTTCGTGTCATCGCTGCGACCAAGACCGAAGATGCGCGTGAGTACCTGCTGTCGCTGGGTGCTGACAAGGTGGTGGTCACCGAAGAGCAG GACTTGTTGATGGCGATCAACAAGTACACCGACAACCGCGGCGTCGATGCGGTTTTCGATGGCCTCGGTGGCCCGCAGATGTCGATTATGGGTGATGTGC TCGCGCCACGCGGCAGTCTGGTGCTGTATGGCCTGCAAGGCGGCAATCAGACGCCGTTCCCGGCCTGCGCAGCCTTTCAGAAGAACATTCAGTTTTACGT GCACTGCCTGGGCAATTTCACCGGCAAACCGGAATTGGGCATCACTCAGGATCAGCAGGCGTTGCAGCGTGCGTTGCAGGACATCAACCAGATGACCGCC GACAATATCCTGAAGCCGTTGCAGACGCGCAGCTTCCCGTTCGATCAAGTGGTGCAGGCGCACCGTTACATGGATGTCTGTCCGATTGGCGGGCGTGCGG TGCTGGAAATCGAGCCCGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCAGCGCTTTTTCACACCTGTGCTTGTTGTCTCGAAAGCCTTCCCTACGGAAGGCTTTTTGCATTTCGCTGTAAAAAACTGCTGTTGATCCATTATTTC AGGGCGACTGAAAATAACGGGCCGATATTTCAGAAGTGCGTACGGTCGTATGGGTTTTTCATGTGCGATTTACGGTTTATTTGAGTTTATCGGGTCTGTC AGTAATGCAAGTGCAAAGTTGGCGTTTCCTACGGGTCATGACGAAAACACGATGGGGTGTGAATAAGGTGGTGCGCTGGAGAACCTTCATTGGCCTGCCT GCAAGTCTGAAAGTGAATACGTCGAGGATCGCTACAGCCTTGATAGGCATAAAGGCATGATTAAACGGCATGTTTAAATTAAGTTTAGTTTTCTGGCGGA GTGCGCAGTTTTCAAAAGCAAACTGTATATTGTAATTGTTTTGCAGATACTGATAATGCGTCGTTAATTACTACTCAGGGAATGAGTCATGCTCGACTAC
|
|
| Amino Acid Sequence |
>alcohol dehydrogenase
MSRTIRFHQFGPAEVLKLEEQPVASPAPGEVQVRVQAIGVSWYDVLWRQNLASTQARLPAGLGYEMAGVVSALGDGVDDLQVGDKVASFPAADANQHPVY GECIVMPRLALTRYPDVLTPVEASVHYTPYLVAYFAYVDLARIKTGQTVLVTDASHCSGPAFVQLGKALGVRVIAATKTEDAREYLLSLGADKVVVTEEQ DLLMAINKYTDNRGVDAVFDGLGGPQMSIMGDVLAPRGSLVLYGLQGGNQTPFPACAAFQKNIQFYVHCLGNFTGKPELGITQDQQALQRALQDINQMTA DNILKPLQTRSFPFDQVVQAHRYMDVCPIGGRAVLEIEPV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|