Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS20870
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 233 | 396 | 1.3E-41 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 225 | 397 | 1.4E-46 |
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 198 | 396 | 1.2E-54 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 223 | 397 | 3.0E-51 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 235 | 392 | 9.2E-42 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 239 | 396 | 1.1E-39 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 228 | 397 | 8.0E-44 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 235 | 394 | 2.54596E-52 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.