Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS23930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. actinidiae ICMP 9617 chromosome Chr, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGAACAGCGCCGCGCCGTTCGTCTGTATTAATTTACAGACCTTCGTCGCAAGCGTCTGCCTTGCCCGGCCACACAGCCGGGCTGTCGGCAGTTACAGCT TTGCTGTTTTGCGTTAGCTAGATTGATTGACCTGTCCAGGCCGCAGATGCGACTCAGACAACCAGTCAAGCACGTCCCGCCTGTTCACAGGCAGCGTCTG CCATGCCCACTCGGGCAGCATTTGGCTGATGACAAGACGAGTATGCCTTGATGACTTCGCAAGAAGCTCAGCCAAGGCAGCGTCTCTCGCCCTGTTCGAA TGAGTATCGTCAACGCCCACGGCCTGATGATCGATTCGCAAAAACCATGCACCCGCTTTTTTCAGCTTTCAGCACCGACCTTCGGATGCAAAGACGTGCC CGCTTATTGCTGTCGTCATACCAAAAGACGGCTGACAGGCTGACGGAACGCTCGTAGAGTCACTCGATATTTTCGCGACACGCTTGATGATGAGAACGCC
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| DNA Sequence for Gene |
>A250_RS23930
ATGGCCGGGCTGATCCCCCAGAGCTTTATCGACGACCTTCTGAACCGCACCGACATTGTCGATGTCGTCAGCTCGCGCGTGCAGCTCAAGAAAGCCGGCA AAAACTACAGCGCGTGCTGCCCGTTCCACAAAGAGAAAACACCCTCGTTCAGCGTCAGCCCGGACAAACAGTTCTATTACTGCTTTGGCTGCGGCGCAGG TGGCAACGCACTGGGTTTCATCATGGACCACGACAACCTGGATTTCCCCCAGGCCGTCGAGGACCTTGCCAAAGCCGCCGGCATGGAAGTGCCACGCGAG CAAGGCGTCAAGGGCCAGAAGCCGCGTCAGCCAACCGACTCACCGCTTTACCCGCTGCTGAACGCCGCCTCCGAGTTTTACCGTCAGGCACTGAAAAGCC ATCCGTCGCGCAAAGCCGCAGTGGATTACCTCAAGGGCCGCGGCCTGTCCGGTGAAATCGCCCGGGACTTCGGCCTGGGCTTTGCGCCACCCGGCTGGGA CAACCTGTATAAGCACCTGAGCAGCGACTCGCTACAGCAAAAGGTCATGATCGATGCCGGCCTGCTGATAGAAAACGCTGAAACCGGCAAGCGCTACGAC CGCTTCCGTGACCGGGTGATGTTTCCGATCCGTGACTCGCGCGGGCGCATCATCGCCTTCGGCGGTCGCGTATTGGGTGACGACAAGCCCAAGTACCTGA ACTCGCCGGAAACGCCGGTGTTCCACAAGGGTCAGGAGCTGTACGGGCTGTTCGAAGCGCGCAAATTCAATCGCAACCTCGATGAAATCATCGTCGTTGA AGGCTACATGGACGTCATCGCCCTGGCCCAGCAAGGCTTGCGCAATGCCGTGGCCACGCTGGGTACGGCCACCAGCGAAGAACACTTGAAACGCCTGTTC AGGGTCGTGCCGAACGTGTTGTTCTGCTTCGACGGCGATCAGGCCGGACGCAACGCCGCATGGCGAGCACTGGAGGCCGCACTGCCGAACCTGCAAGACG GAAGGCGCGCGCGCTTTCTGTTTCTGCCCGAAGGCGAAGACCCGGACACATTGGTGCGCTCGGAAGGCACCGACGCGTTCAAGGCGCGCATCAATCAGCA CGCCCAGCCGCTGGCCGATTATTTTTTCGAGCAACTGACCAAAGAATCCGACCCGCGCTCGCTGGAAGGCAAAGCGCACATGGCCACCCTCGCCGCGCCA CTGATCGATAAAGTGCCCGGCGCGAACCTGCGGATTCTGATGCGTCAGCGCCTCAGTGAAATTACCGGGCTGACCGGCGAGGCCGTCAGCCAACTGGTGC AGAGCGCACCCGCAGACGCGCCGCCGAGCTACGACCCGTATGTCGATTACGACGCCATGCCCGACTTCGCCGATTACCAGCCACAAGGCGGGTACGAGGC GCAGCAGGAATGGACACCAAAGAAAGCCGGCGGTCCGAATCAGAAAAAATGGGACAACAACAAGTCCTGGGGCAAGAAAGGCAAGCGTCAGGAGTTCGAA CCGCGCACGCCGCGTGTACCGACCGCCGTCGAGCCGCCTATGCAGGCCGCATTGAGAACCTTGCTGCACCACCCTGAACTGGCCGAAAAGGTCGAAAATG CCAGCCATTTCGCTGCAGAAGACCAATCAAACGCACAACTGCTGGTTGCTCTTATCGAAGCCCGGCAAAAGAATCCCAACCTGCGGTCGTTACAGTTGAT AGCGCGATGGCACGGGACTGAACAGGGCCGCCTGCTGCGTGCACTGGCAGAAAAGGAATGGTTGATTGAGACCGACAACCTTGAACAACAGTTTTTCGAC ACTATAACTAGTTTATCCGCTCGCCAACGCGAGCGCAGTCTGGACCATCTGATCAGCAAGGCTCGGCAGACCGAGCTGAGCGCAGAAGAGAAAATTCAGC TAAGGGAACTGCTAAATCGCAATGTTCCCGCACAAAACCCGACCTCAACTGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCATAGCTCGGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATC AAAGAGTTGATCACCCTGGGTCGTGAGCAGAAATATCTGACTTACGCAGAGGTCAACGACCACCTGCCCGAGGATATTTCAGATCCCGAGCAGGTGGAAG ACATCATCCGCATGATCAACGACATGGGGATCCCGGTACACGAGAGTGCTCCGGATGCGGACGCCTTGATGCTGGCCGACGCCGATACCGACGAGGCAGC CGCAGAAGAAGCGGCTGCAGCGTTGGCAGCGGTCGAGACCGATATCGGGCGTACCACCGATCCCGTTCGTATGTACATGCGTGAAATGGGCACCGTTGAA CTTCTGACCCGTGAAGGCGAAATCGAAATCGCCAAACGTATCGAAGAAGGCATCCGTGAAGTGATGGGCGCAATTGCGCACTTCCCAGGCACGGTTGACC
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYSACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFIMDHDNLDFPQAVEDLAKAAGMEVPRE QGVKGQKPRQPTDSPLYPLLNAASEFYRQALKSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLYKHLSSDSLQQKVMIDAGLLIENAETGKRYD RFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLFEARKFNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPNVLFCFDGDQAGRNAAWRALEAALPNLQDGRRARFLFLPEGEDPDTLVRSEGTDAFKARINQHAQPLADYFFEQLTKESDPRSLEGKAHMATLAAP LIDKVPGANLRILMRQRLSEITGLTGEAVSQLVQSAPADAPPSYDPYVDYDAMPDFADYQPQGGYEAQQEWTPKKAGGPNQKKWDNNKSWGKKGKRQEFE PRTPRVPTAVEPPMQAALRTLLHHPELAEKVENASHFAAEDQSNAQLLVALIEARQKNPNLRSLQLIARWHGTEQGRLLRALAEKEWLIETDNLEQQFFD TITSLSARQRERSLDHLISKARQTELSAEEKIQLRELLNRNVPAQNPTSTGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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