Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS24400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. actinidiae ICMP 9617 chromosome Chr, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCAGCAACTTCCCGCGGCGCAACCGGATCATCAGCGGCTTGTCCCTCGGCGTACTGGTGGTCGAGGCCAGTGTTGCCAGCGGCTCGTTGATTACCGCAC GCCTGGCCGCCGAGCAAGGGCGAGAGGTTTATGCGATACCCGGCTCTATCCACCATCCGGGCGCCAAAGGGTGTCACCAGTTGATAAGGGACGGCGCGAC GCTGGTCGAGACCGTCGACCATATTCTGGAAGGCTTGCAGCACTGGAAGCGCATTGCACCCGGCGCCGACTCTTCAAATACCGAACCTGCTCCCTGCGAC CATCCACTATTGGCTTTGCTCCACGCCGCGCCGCACACCAGCGAGGGGCTGTCGGTCTCCAGCGGCTGGCCATTGCCGAAAGTATTGGCTGGCCTGACCG AGCTGGAACTGGACGGGCGCATAAGCTGTGAAGCAGGACGATGGTTCGCCAGCGCGCCCTGAGGTTAAACTGCCGCCAGGATTTATCGGAGAAACAGACA
DNA Sequence for Gene
>A250_RS24400
ATGGTCAGCAGTTGGCGTGTGCAACAAGCCGCTCAGAATATTCGAGCCGGTGCTGTGATTGCCTACCCGACCGAAGCAGTCTGGGGGCTGGGGTGCGATC CATGGGATGAAGAGGCGGTCTATCGCCTGCTGGCGATCAAATCGCGGCCAGTGGAAAAAGGCCTGATCCTGATCGCGGACAACATTCGCCAGTTCGACTT TCTGTTCGAGGACTTCCCCGAGTTGTGGCTCGACCGCATGGCCAGCACCTGGCCAGGGCCCAATACCTGGCTGGTGCCGCACCAGAACCTGTTGCCCGAG TGGATCACTGGTATTCACGAAACCGTGGCGCTGCGTGTCACCGATCACCCGACTGTACGCGAACTGTGCGCGCTGGTCGGCCCGCTGATCTCCACATCGG CCAACCCGGCGGGTCGCCCGGCCGCGCGTTCACGACTGCGGGTTGAACAGTACTTCCGTGGCCAGATCGACGGCGTGCTCGGCGGCAGCCTGGGCGGCCG CCGAAACCCCAGCGTGATACGTGATATCGCCACCGGGCAGGTGATGCGCGCCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCTCGCTCAGGGAATCAGGATGGTCGAGCCAGTGGTGCGCCGCGCCGAGAGTTCGATCTGCGCCTGGGCGGCGTCCTTGAGGGCGTACTGCTGAATGCC ATCGACCTTGAGTTTGCCGCTGGCCAGCATGTTGAACAGCTCATCGGCCATCGTTTGCAGGTTTTGCGCGTTGTTGGCGTAGCTGCCCAACGTAGGGCGG GTGACATACACCGAACCCTTCTGCGCCAGAATGCCCAGGTTTACGCCTGACACCGGCCCCGATGCATTGCCGAAACTCACCACCAGCCCACGCGGTGCCA CGCTGTCGAGTGAAGTCAGCCAGGTGTCCTGCCCCACGCCGTCATAGACCACCGGGCATTTCTTGCCGTCGGTCAGCTCCAGCACACGCCTGGCGACGTC TTCATGGCTGTAGTCGATGGTTTCCCAGGCGCCGAGTGCCTTGGCGTGCGCGGCTTTCTCCGGCGAACTGACCGTACCGATCAGCTTGGCACCCAGTGCC
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVSSWRVQQAAQNIRAGAVIAYPTEAVWGLGCDPWDEEAVYRLLAIKSRPVEKGLILIADNIRQFDFLFEDFPELWLDRMASTWPGPNTWLVPHQNLLPE WITGIHETVALRVTDHPTVRELCALVGPLISTSANPAGRPAARSRLRVEQYFRGQIDGVLGGSLGGRRNPSVIRDIATGQVMRAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site