Strain | Pseudomonas putida S16 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GATGAGCAGGCGCTGCAGATGGTGTTGCGCCAGGGTATTGCCGACCCGGCGCAGTTCGGCCCGAATGCGCCGCGCTCCACCGACGAGTTGCTCAGCTACC TGCGCCGCGCTCGCGAGCGCGGTTATGCCTGGGTCGAGGAAACCTCGGCCATTGGCACCTCGGCCCTGGCTGCGGTGGTGCGCCGCCCGCAAAGTGACGA GGTGATCGGTGTGCTGAGCATTGCCGGGCCCAGTGCGCGCCTGGCGCAAAGCCGCCTGGCAGAACTGGCGCCGCTGTTGCTGGCGGCGGCAGAGGAACTG TCGGCGGCCAGCCGGGCCAGTGAGTTGTTCGCCTGAAGGTGCATTTCCGGTCGATTACCGCACACTCTGTTCTGCGGCTTCTTCTTAAAAGCTGAACCGG GTTCTAAATTGTCGAATGTGGATTGTGGAATCATATTCCGGAATCCGCATGACAACAATGACAAGAGGACAGGCTGTTGAACGCACCCCTTCGTATTGCC
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DNA Sequence for Gene |
>PPS_2145
TTGATCGGCGCCGGCAGCATGGGCCGCCAGCATTACCAGCATTTGCTGAATGTGCCGCAGGCCCAGCTGTGCGCTGTGGCCGACCCGGGCCCGCAGGCCG AGGCCTTTGCCGCCGAATGCGGCGTGCCCTGTTTTGCCGACCACCGCCAGATGCTGGAGCACGCGCGCCCCGAGGCAGTGATCGTCGCCAACCCGAACAA CCTGCATGTCGCCACCGCCCTGGACTGCGTCGAGGCCGGTGTACCGGTGCTGGTCGAAAAACCGGTGGGCGTGCACCTGGATGAAGTCCGCGCGCTGGTG GAAGCCTCGCGCCGCCACGATGTTCCGGTGCTGGTCGGCCATCATCGCCGGCACAACCCGCTGATCGCCAAGGCTCACCAGGTGATTGCCGACGGCAAGC TGGGTCGACTGATCAACGTCACCGCGCTGTGGCAGTTGCAAAAGCCCGACAGCTATTTCGACACCCCCTGGCGCCGCGAGCCGGGCGCTGGCTTCCTGCT GACCAACCTGATCCATGACCTCGACCTGCTGCGCCACCTGTGCGGCGAGGTGGTACAGGTGCAGGCATTCACCCGCAACGATGTGCGCGGTTTTGCCAAC GAGGACAGCGCCGCGGTGCTACTGCAGTTCGCCAATGGAGCATTGGGCAGCCTGACTGGCTCCGACGCGGTGGCCGCGCCGTGGAGCTGGGAGCTGGACT CCGGCGAAAGCCCGGTCTACCCGCGCCAGGATGGCCAACCGTGCTACCTGCTGGCCGGCACCCAGGGGGCCCTGAGCATTCCGCAACTCAAGCGCTGGCA CTACGCCGAGGCCGGGGCGGGCTGGCACACGCCGTTGTTGCAGAGCGAGGAAAGCATCCCCGCCGGCGAGGCATTGACCTTGCAGTTGCAACACTTCGTG CAGGTTGCCCGGGGTGAGCAGGCGCCGCTGATCGATGCCGCCGATGGTGGCCGTACCCTGGCGCTGATCGAGGCGATCCGCCAGGCCGCGGAAACTGGCC GGGCCTGTGCGCCCGAGCACATTGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTTGTCTGGTGACCATAATGACTGAACGAATTTTCTCCCTGGCGGCCCTGACGGTACTCGAGCTGTCCCCGCCGGACATGGTCGAGGCAGCAGCCCGCGC CGGTTACAGCCACGTTGGCCTGCGCCTGGTGCCCGCCACCGAGCAGGAGCAGCATTTCCCGCTGGTGGCCGATGCCGGCCTGCGCCGGCAGACCCAGGCG CGCCTGCGCGACACGGGCATCAAGGTGCTCGACCTGGAGATCCTGAGGCTGAAGCCGGAAACCTGTGTCGCCGATTTCGAGCCGATCCTGGCGGTGGGCG CCGAGCTGGGCGGCACGGAGCTGCTGGTGGCTGGCAACGACCCGGATGAAGCGCGGCTGACCGAGCGCTTTGCTGCGTTGTGTGACCTGGCGGTGGGGTA TGGCATCCATCCGCATCTGGAGTTCATGCCCTGGACTGATGTGCGTGACCTGCGCCAGGCCATGCGGGTGGTGGCCAACGCCGACCGTGCCAATAGCTGT
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Amino Acid Sequence |
>oxidoreductase domain-containing protein
MIGAGSMGRQHYQHLLNVPQAQLCAVADPGPQAEAFAAECGVPCFADHRQMLEHARPEAVIVANPNNLHVATALDCVEAGVPVLVEKPVGVHLDEVRALV EASRRHDVPVLVGHHRRHNPLIAKAHQVIADGKLGRLINVTALWQLQKPDSYFDTPWRREPGAGFLLTNLIHDLDLLRHLCGEVVQVQAFTRNDVRGFAN EDSAAVLLQFANGALGSLTGSDAVAAPWSWELDSGESPVYPRQDGQPCYLLAGTQGALSIPQLKRWHYAEAGAGWHTPLLQSEESIPAGEALTLQLQHFV QVARGEQAPLIDAADGGRTLALIEAIRQAAETGRACAPEHIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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