Pseudomonas syringae UB0390, IV03_RS00385

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig82.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCATTATCAGCAAAGCGGACGGCCAGGCAGTGAGGATTTGCCGCAGGGCGTCGCGAGCGCTTTATAGCTGCGCGAGGCATGGGCAATGTCCTGGCTTGA GAAGGGCGCTTTTCAGGCGCGCACAAAAAAGGCCACTCTTTCGAGTAGCCTTTTTTGATGTTTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGG TTATGAGCCCGACGAGCTACCAGACTGCTCCATCCCGCGTCTGTGTGGCGGCATTCTACAGAGAGATGACGAGGTGTCAATGGTTAGTTTCAAAAAAGTG CTTTTTCTTCAAATGCTTAGCGGATCCAAATGATCGGTCTGCTCGGCATCGGCGCTTGCATGACGGGCCTTTGCAGCTGTTTCGGTCATCCGTGATGGGC TTTTGACTGCTTTTCATGACGACCTTTCACATCATTGGATGTTACTTGCCGGTACGAATGAGATACTGCGCGGCCATTGATTGCAAAATCCCATCAGGTC
DNA Sequence for Gene
>IV03_RS00385
ATGACGCAGCGCAAAATCATCCACATCGACTGTGACTGCTTTTATGCAGCCATTGAAATGCGTGACGAGCCCGACCTCGCTGGCAAGCCGCTGGCGGTCG GCGGCTCTGCGGAGCGGCGCGGGGTGATTGCGACCTGTAATTATGAGGCGCGCGCCTACGGTGTGCGTTCGGCCATGTCGTCCCGGCATGCGCTCAAGCT CTGCCCGGACCTGACCATCGTCAAGCCGCGCATGGATGCTTATAAAGAAGCATCGCGGGAAATCCATACGATCTTTCGGGATTACACCGACCTTATAGAG CCGTTGTCTCTGGATGAGGCCTTTCTGGACGTGTCCGAGGCCGGGCACTTTTCCGGGAGCGCCACGCGCATCGCGCAGGACATCCGTCGCCGGGTCTCGA ATCAGCTGCATATCACGGTGTCGGCAGGCGTTGCGCCCAACAAGTTTCTCGCCAAGATCGCCAGCGACTGGAAAAAGCCCAACGGGTTGTTCGTCATCAC GCCGGATCAGGTCGAGGATTTCGTCGCCTCCCTGCCAGTCACCAAGCTTCATGGCGTAGGAAAAGTCACCGCAGACAAGCTCGGCCGACTGGGTATCGTC GATTGTGCCGACCTGCGAAGCCGCAGCAAGCTCGCGCTGGTCAGGGAGTTCGGCAGCTTTGGTGAGCGCCTCTGGAGTCTGGCGCACGGGATCGATGACC GGCCGGTGCAGAATGACAGCCGGCGTCAGTCAGTCAGCGTTGAAAATACTTACGACACGGATCTGCCCGATCTGGCGGCCTGCCTGGAAAAGCTGCCCGA CCTGCTGGAAACCCTGAGTGGCCGGATGGCCAGAATGGAAGGGCAGTACCGGCCCGGCAAGCCGTTCGTCAAAGTGAAGTTTCACGATTTCACGCAGACG ACTCTGGAGCAATCCGGAGCCGGCAGGGATCTGGGCAGTTATGAACAGTTGCTGGCTCAGGCGTTCGCTCGCGGTGGCAAGCCGGTCAGGTTGCTGGGCA TAGGCGTACGTCTGCACGATCTGCGTGCAGCCCATGAACAGCTGGAATTGTTCTCTCGATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGACTGTGACTGGCCGCGGTTAAACGCCGCGGCCTTTCACGTTACTGGCTCTGGGCAGGAACGGCGACCAGGCGGCCGGCGTCTCTGGCGAGTGACTTGA GAAATTCACCCTGCAGTTGCGGATCGTTGCGCGTCAGTTCGATCAGGCTCTGTTCCAGCTCGCTGGCTTCTTCTTCCAGGCCCATATCAGAAAGACGTTT GACGCGATGCACCCACTGGCTGACCTCGTCATCTTCAAGATCGTCGTAGATCAGGGCGTGCGCCTCCAGCAACTTGCCGCGTAGCGAATGGCTGATGGGC AAACTGGCGTTTGCGTGCGCGCTGTCCTGATCGTCTTCGACATTGATATAGATGCGCGTGATGCGGCTCAGGTCCTGTTCGGCAAACGGACTGTCCAGCA GGTTCAGGCGCAGAATGCCGTTGCGGTCAGTGCTCATTTCGTGAGTTTCATTGCCAGCCTTGACCATCACCGGGCGTTCATTCCAGGGCAGCGTGGAGTT
Amino Acid Sequence
>DNA polymerase IV
MTQRKIIHIDCDCFYAAIEMRDEPDLAGKPLAVGGSAERRGVIATCNYEARAYGVRSAMSSRHALKLCPDLTIVKPRMDAYKEASREIHTIFRDYTDLIE PLSLDEAFLDVSEAGHFSGSATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVASLPVTKLHGVGKVTADKLGRLGIV DCADLRSRSKLALVREFGSFGERLWSLAHGIDDRPVQNDSRRQSVSVENTYDTDLPDLAACLEKLPDLLETLSGRMARMEGQYRPGKPFVKVKFHDFTQT TLEQSGAGRDLGSYEQLLAQAFARGGKPVRLLGIGVRLHDLRAAHEQLELFSR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site