Pseudomonas syringae UB0390, IV03_RS01120

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig81.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGTGCGCAAGCGTCCGTTCTGGCTGACGCCGGGGGAGGGCGCCGCGCTGTTTTTCGCCGCGATCTGGGAAGCCTATCCGGTGCAGGGGCATACTTACCT GAGCGTCGCGGTGGTCACCCAGGCGGCTGCGACCCAGCGTCGGCCGCTGATTCTGGATGCCAAGGGCCAGAAAGACTGGCTGGCCGCCGACACGCCGCTG CCGACCCTGCAAGCGTTGCTGGCTGCCCCGCAGACGGCGCTGCGTGAAAGGCCTCTGGCCAATCTGGTCAATGATCCCAAGCTGAATGCGCCCGAGTGCC TCACGCCATTAAGCTAGTCGGGCAGGGCAAAAAGCACCGAATCGGACAAATCCGATATCCGCGTTGAAGTACATCTGATACAAACTGGACACACCTGCGG GAACCATCCACCCCTGTCAAAGACCAAGATGCCAGTTGGCCGGTATCTGGCGCAGAGGTCTGCCCCGGGACTGACCGTTTCATAGACAAGGAGATACACC
DNA Sequence for Gene
>IV03_RS01120
ATGCGTCCTTCATTTGCCTTCTGTGCCTTGAGCGCTGCGTTGCTGCTCGGCGGGTGTCAGGCAGTCAATACCACGAGTGGTGACTCGGTCGGTGTGGAGC GCAAACAGTACATGTTCAGCATGCTCTCCACGGATGAAGTCAACAAAATGTACGCCCAGTCCTACCAGCAGACCGTTGGCGAGGCGACCAGCAAAGGGGT GTTGGACACCACCAGCGCCAATGCCAAGCGGGTTCATGCAATCGCCGATCGACTGATTGCCCAGGCGCCCAAATTGCGACCTGATTCGGCGCAGTGGCAG TGGGAAGTCAACCTGATCAAAAGTGACGAGCTGAACGCCAACTGTGGCCCTGGCGGCAAGATCATTGTCTACAGCGGTCTGATCGATACCCTCAAACTGA CCGACGATGAGATCGCTGCGGTTATGGGCCACGAGATCGCCCATGCCCTGCGCGAGCACGGGCGTGAAGCGATGTCCAAGGCATACGGTGTTTCAATGGC CAAGCAGGGCGCAGGTGCCTTTCTGGGATTGGGGCAGGACAGCCTGGCGTTGGCAGATACCGTGGTCAATTACAGCCTGACGCTGCCCAACAGCCGTAGC AACGAGAACGAAGCCGATCTGCTCGGTCTGGAGCTGGCCGCACGCGCCGGTTACAACCCTAATGCGGCGATCACCCTGTGGCAGAAGATGACCCAGAACT CCGGTGGTTCGCAGCCTGAGTTCATGAGCACTCACCCGGCCTCGGAAAGTCGCATCGCTTCGTTGCAGGCTGCGATACCGAAAGTCATGCCGCTGTACCA GAAAGCCGCTAAATCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGGCTGAGCCGCCGGTAGCGTTGCGAGTGTCTTCGCAATGCTACCGGCCCGCATCACACCCAGCCGCTGACCTGCATGGCCTTGTAAACCGCCACCAGC GCCAGCACGAAGAATGCGCAGGCAGCCAGTCGGCGGATCAGGGGCAGCGGCAGCTTCTCGGCGGCGAAATTGCCCGCCAGTACCACCGGCACGTTGGCCA GCAGCATGCCCACCGTGGTGCCCAGAATGACCAGCCACAGATAGGAATACTGCGCCGCCAGCATCACCGTGGCGATCTGCGTCTTGTCACCGATTTCAGC AATGAAGAACGTGATCAGCGTCGTCATGAACGGACCGAACTTGCGTGCCGTGCTGGCTTCGTCGTCATCCATCTTGTCCGGAACCAGTGTCCACAGCGCC GTGGCGGTAAAGCTGGCGGCGAGAATCCAGTGCAGCACTGCGTCCGAGAGATAACTGCTGAACCAGGCACCTACAGCGCCGGCCGCCGCATGGTTGGCCA
Amino Acid Sequence
>peptidase M48
MRPSFAFCALSAALLLGGCQAVNTTSGDSVGVERKQYMFSMLSTDEVNKMYAQSYQQTVGEATSKGVLDTTSANAKRVHAIADRLIAQAPKLRPDSAQWQ WEVNLIKSDELNANCGPGGKIIVYSGLIDTLKLTDDEIAAVMGHEIAHALREHGREAMSKAYGVSMAKQGAGAFLGLGQDSLALADTVVNYSLTLPNSRS NENEADLLGLELAARAGYNPNAAITLWQKMTQNSGGSQPEFMSTHPASESRIASLQAAIPKVMPLYQKAAKS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site