Pseudomonas syringae UB0390, IV03_RS02990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig76.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGCGCGCGAGCAACAGGTCGATCCCCTTACGCTAAAGGGTTCGTACGCCGGCGCAATGGGACTGCCGCAGTTCATGCCGAGCAGTTTCCGCGCCTACG CAGTGGATTTCGACGGCGACGGTCATATCAACATCTGGACCGACCCGGACGATGCCATCGGCAGTGTCGCCAGCTATTTCAAACGTCATGGCTGGGTGGC CGGTCAGCCGGTGGTCAGCCGTGCCACGGCACGTGGCGACCGGGTTGACGAGGGGTTGAGCCCTGCGCTTGATCCGGTAATGTCGGTCGGGGAGTTGCGA CAGCTGGGCTGGGCGAGTCATGATGCGCTGCGCGACGATATGCCGGTGACGGCGTTTCGTCTGGAAGGCGACAATGGTCCTGAATACTGGCTGGGTTTGA ACAATTTTTATGCAATCACTCGTTATAACCGCAGTGTGATGTACGCCATGGCCGTATATCAGCTGTCTGAATCGTTGGTTCAAGCTCGAGGCGTCAAGTA
DNA Sequence for Gene
>IV03_RS02990
ATGCGGGCATCGCCGATTCTTCAATCATTCAAGCTTCTGGCGCTGACCGGCCTGGCAGTGCTGGTCGCCAGTTGCTCGTCGCCATCGCGCACGACAACTT CACCGTCGCCCAAGGGCGGCGCCGTGGTGCGCTCGATGCCGGGGCTGGACATCAACCGGGCCCACAAGGACGGCGCGCCGTGGTGGGATGTGGATGTCTC GCGCATCCCTGATGCAACGCCGACCCTGCACACCGGGGCCTACAAGGCCAACCCGTACACCGTGCTGGGCAAGACCTATTTCCCGATGAGCGATTCCAGG CGTTACGTCGCTTCGGGCACCGCTTCCTGGTACGGCACCAAGTTTCATGGTCAGAACACTGCCAACGGCGAGGTGTATGACCTGTACGGCATGAGTGCCG CACACAAGACCCTGCCGCTGCCCAGCTACGTCAAGGTGACCAACCTGGACAACAATCGCACAGTGATCCTGCGCGTCAATGATCGCGGGCCGTTCTATTC CGACCGCATCATCGACCTGTCCTACGCGGCCGCCAAAAAGCTCGGTTATGCCGAAACCGGCACTGCACGGGTCAAGGTCGAAGGCATCGATCCGCAGGAG TGGTGGGCGCAACGGGGTCGTCCGGCGCCGCTGATGCTCAATCAGCCGCAGGTCGTTGCGCAGGCGACACCGCCCGCGCTGTCCACTTCGACCGGCACCG TCGAGCAGTACACACCGCCCCCTCAGCAGCACGCCGCACCCGTCGTGCCGTTGCAGGTTGACGCAAAAAAAAACGCTTCAGGACAAGCCGCTGGGCTGTT TCTCCAGGTGGGAGCCTTCGCCAACCCGGACGCTGCGGAACTCCTGAGGTCGAAATTGAGCGGGATGGTTCGAGCGCCGGTGTTCGTCAGCTCGATAGCG CGCAATCAGCAAACGCTCTATCGAGTGCGGATGGGACCGATCGACACGCAGGGTGAAGCCCAGCAGCTGCAAAACAGCGTCAGGTCGGCCAATCTGGGCC AGCCGAGCGTAGTGACATCGGATCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTTTTTCGACAATCGTTCTCCGGCAACAACGGAGAACGGTATGCAGTCGCAGGCGGCGCAGATTTGCTTTCAGGGCAAGCGTTGCAGGTAACTGCCCAC AAGGTCGTGTGTCGAACAGGCGACTTTGTCAGCCAGGGTTACAGCCTGGCGCCACGAGCCGTACCGAGGCGTTTTCGCTTCGCCGGTCTGTTCAGTTTTG CCCGCAAGGGCATGTTTGCCCATTAGGATTCTCGAGAGACGGATGAACATCACCACCTTTGCAAAACGTTTGTGCCTGCTTGTTCCACTGATTATCACCC CGACGGTATGGGCGGCAGAGCAGATGACGCCTGCTGCACCACAGCTGGCGGCCAAGTCCTACGTGCTGATGGATGCCACCAGCGGCAACGTCCTGGTCGA GAATAACGGTGATCAGCGTCTGGCTCCTGCCAGTCTGACCAAGTTGATGACCGCCTACATCGCGACCCTGGAAATCCGCCGCGGCCAGATCGGTGAAAAC
Amino Acid Sequence
>rare lipoprotein A
MRASPILQSFKLLALTGLAVLVASCSSPSRTTTSPSPKGGAVVRSMPGLDINRAHKDGAPWWDVDVSRIPDATPTLHTGAYKANPYTVLGKTYFPMSDSR RYVASGTASWYGTKFHGQNTANGEVYDLYGMSAAHKTLPLPSYVKVTNLDNNRTVILRVNDRGPFYSDRIIDLSYAAAKKLGYAETGTARVKVEGIDPQE WWAQRGRPAPLMLNQPQVVAQATPPALSTSTGTVEQYTPPPQQHAAPVVPLQVDAKKNASGQAAGLFLQVGAFANPDAAELLRSKLSGMVRAPVFVSSIA RNQQTLYRVRMGPIDTQGEAQQLQNSVRSANLGQPSVVTSDQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site