Pseudomonas syringae UB0390, IV03_RS05135 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig55.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGGAAACCGACATTCCGGTGTTCGGCATCTGCCTCGGCCACCAGTTGCTGGCGCTGGCTGCGGGTGCCAAGACCGTGAAGATGGGCCACGGCCACCAC GGTGCCAACCACCCGGTCCAGGATCTGGACACCGGTGTGGTCATGATCACCAGCCAGAACCACGGTTTTGCGGTGGATGAGGCAACCCTGCCGAGCAACG TTCGCGCCATTCACAAGTCGCTGTTCGACGGCACCCTGCAGGGTATCGAACTGACCGACAAGAGCGCATTCAGCTTCCAGGGTCACCCTGAAGCGAGCCC GGGCCCGAACGACGTCGCGCCTTTGTTCGATCGCTTTATCGAAGCCATGGCCAAGCGCCGCTGACCGGTTGCCTTGAGACTGTAATACGCAGGTGCCCAG GGCGGCCCCGGACTCAGTGTCCGGTCGCTGCCGCCCAGGCCACCTCAGACAAATGTTCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAACCC
DNA Sequence for Gene
>IV03_RS05135 |carB
ATGCCAAAACGTACAGATATTAAAAGCATCCTGATTCTCGGCGCCGGCCCCATCGTGATCGGCCAGGCCTGTGAGTTCGACTACTCCGGCGCCCAGGCCT GCAAGGCTCTGCGTGAGGAGGGTTACCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAAAAGGAACGTCCGGACGCACTGCTGCCAACCATGGGCGGCCAGACGGCTTTGAACTGCGCGCTG GATCTGGAGCGCGAAGGCGTTCTGGAGAAGTTCGGTGTCGAAATGATCGGCGCTAACGCTGACACCATCGACAAGGCTGAAGACCGTTCGCGCTTCGACA AGGCGATGAAGTCCATCGGCCTGGCGTGCCCGCGCTCCGGCATCGCGCACAGCATGGAAGAAGCCAACGCGGTTCTTGAAAAGCTTGGCTTCCCTTGCAT CATCCGTCCGTCGTTCACCATGGGTGGCACCGGCGGCGGTATCGCTTACAACCGTGAAGAGTTCGAAGAAATCTGCGCCCGTGGTCTGGACCTGTCGCCA ACCAAGGAACTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAGTACGAGATGGAAGTGGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCGA TCGAGAACTTCGACCCGATGGGTGTGCACACCGGTGACTCGATCACCGTGGCGCCGGCACAGACCCTTACCGACAAGGAATACCAGATCCTGCGTAATGC CTCGCTGGCAGTGCTGCGCGAGATCGGCGTTGAAACCGGTGGCTCCAACGTTCAGTTCGGCATCTGCCCGAACACCGGCCGCATGGTCGTGATCGAAATG AACCCGCGTGTATCGCGCTCTTCGGCACTGGCTTCCAAGGCGACCGGCTTCCCGATCGCCCGCGTTGCCGCCAAGCTGGCAGTGGGCTACACCCTCGACG AGCTGTCGAACGAAATTACTGGCGGCAAGACCCCGGCATCGTTCGAGCCGTCGATCGACTACGTCGTCACCAAGCTGCCGCGCTTTGCCTTCGAGAAATT CGCCAAGGCCGATGCGCGTCTGACCACTCAGATGAAGTCGGTCGGTGAAGTCATGGCCATCGGCCGTACCTTCCAGGAATCCCTGCAGAAAGCCCTGCGC GGCCTGGAAGTTGGTGTCTGCGGTCTTGATCCGAAGCTGGACTTGAGCCACCCGGAAAGCATGAGCACGCTCAAGCGCGAGCTGACCGTGCCGGGCGCCG AGCGTATCTGGTATGTCGCCGACGCCTTCCGCGCCGGCATGACGGTCGAAGAAATCTTCGCCATGAACATGATCGACCCATGGTTCCTGGTGCAGATCGA AGACCTGATCAAGGACGAAGAGAAGATCAAGACCCTGGGTCTGTCGTCGATCGACCGCGACCTGATGTTCCGTCTCAAGCGCAAGGGTTTCTCCGACGCG CGTCTGGCCAAGCTGCTGGGCGTTACCGAGAAGAACCTGCGGACGCATCGTCACAAGCTGGAAGTGTTCCCGGTCTACAAGCGCGTCGACACCTGCGCAG CCGAGTTCGCAACCGACACCGCGTACCTGTACTCGACCTACGAGGAAGAGTGCGAAGCCAACCCGTCTACGCGTGACAAGATCATGATCCTGGGTGGTGG CCCGAACCGCATCGGTCAGGGTATCGAGTTCGACTACTGCTGCGTACACGCCGCGCTGGCACTGCGTGAAGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACTGACTACGACACCTCGGACCGTCTGTACTTCGAGCCGGTCACCCTGGAAGACGTGCTGGAAATCGTCCGTGTCGAGAAGC CGAAAGGCGTGATCGTCCAGTACGGTGGCCAGACGCCTCTGAAGCTGGCGCGCGCTCTTGAAGCCGCCGGTGTGCCGATCATCGGCACCAGCCCTGATGC CATCGACCGTGCCGAAGACCGCGAGCGCTTCCAGCACATGGTCGAGCGTCTGAACCTGCGTCAGCCGCCAAACGCAACTGTGCGCAGCGAAGACGAAGCG ATTCGTGCCGCAGCGAAGATCGGTTATCCACTGGTGGTGCGTCCGTCCTATGTACTGGGTGGCCGTGCGATGGAAATCGTTTATCAGGAAGACGAACTCA AGCGTTACCTGCGCGAAGCGGTTCAGGTGTCCAACGACAGCCCTGTGCTGCTGGACCACTTCCTGAACTGCGCAATCGAGATGGACGTCGATGCGGTCTG CGACGGTACCGACGTGGTGATCGGCGCGATCATGCAGCACATCGAACAGGCGGGCGTTCACTCCGGTGACTCCGCGTGCTCGCTGCCGCCTTATTCGCTG CCGGCTCACATCCAGGACGAGATGCGCGAGCAGGTCAAGAAGATGGCACTGGAGCTGGGCGTTGTCGGCCTGATGAACGTGCAGCTGGCGCTTCAGGGCG AAGATATCTACGTCATTGAGGTCAACCCGCGTGCATCGCGTACCGTGCCATTCGTTTCCAAGTGCATCGGTGTTTCCCTGGCGATGATCGCTGCCCGCGT GATGGCAGGCAAAACCCTGAAAGAGCTGAACTTCACCAAGGAAATCATTCCGAACTTCTACAGCGTGAAAGAGGCAGTGTTCCCGTTTGCAAAATTCCCT GGCGTTGACCCGATCCTCGGCCCGGAAATGAAATCGACCGGTGAAGTGATGGGCGTGGGCGATACCTTCGGCGAAGCGTTTGCCAAGGCCCAGATGGGCG CGAGCGAAGTGCTGCCGACTGGCGGTACCGCGTTCATCAGCGTGCGTGACGATGACAAGCCTCTGGTTGAAGCGGTCGCTCGTGACCTGATCAATCTCGG TTTCGAGATCGTTGCCACCGCAGGCACTGCCAAGCTGATCGAAGCGGCAGGCCTGAAAGTGCGTCGCGTCAACAAGGTGACCGAAGGCCGTCCGCATGTG GTCGACATGATCAAGAATGACGAAGTCACCCTGATCATCAACACTACCGAAGGTCGCCAGTCGATCGCGGATTCCTACTCCATCCGTCGCAACGCCTTGC AGCACAAGATTTATTGCACCACTACCATTGCAGCAGGCGAAGCGATCTGTGAAGCGCTCAAGTTCGGTCCGGAGAAGACCGTACGCCGCTTGCAGGATCT CCATGCAGGACTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATACCCAATGACCGTTCAGGGCGCTCGCGCCCTGGAAGAAGAGCTGACCCATCTGACCAAGGTGGTCCGTCCCAAGTTGAGCCAGGACATCGGTAC TGCGCGCGAACTGGGCGACCTCAAGGAAAACGCCGAATACCACGCTGCCCGCGAGCAGCAGGGGATGGTCGAGGCGCGTATTCGTGATATCGAAGGCCGC ATGCAGAACGCTGTGGTCATCGACGTCACGACTATTCCGCACACCGGCAAGGTTATCTTCGGCACGACAGTCGAAATCGCCAACGTCGAGACTGACGAAA GCGTGGTCTATCAGATCGTGGGTGAGGACGAAGCGGACATCAAGAAAGGCAAGATTTCAGTGGGTTCGCCCATTGCCCGTGCCTTGATTGCCAAGGAAGA GGGTGATGTCGTTGTCGTGAAAACGCCTAGCGGCGTTATCGAGTACGAAATCATCGAAGTGCGTCATATCTGATGCTGGCGCCCGTGTTTACGGGCGCTT
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDPKLDLSHPESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLIKDEEKIKTLGLSSIDRDLMFRLKRKGFSDA RLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFATDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATVRSEDEA IRAAAKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site