Pseudomonas syringae UB0390, IV03_RS05375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig55.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CATTCCGCCAGTCACCGGCTTCATGCTGATCGACACCCTGCTCAGTGATGAACAGGGTGCGTTTCTCGATGCCCTGCACCACATGGTTCTGCCGGCGATC GTGCTGGGTACCATCCCGCTGGCGGTGATCGCCCGGATGACCCGCTCGTCGATGCTCGAAGTACTGCGTGAAGACTACGTGCGTACCGCCCGCGCCAAAG GCCTGTCGCCTGCCCGTGTGGTATTCGTTCACGGCCTGCGCAACGCGCTGATTCCGGTACTGACTGTGTTCGGTCTGCAAATCGGTACGTTGCTGGCCGG TGCGGTACTGACCGAAACGATCTTCTCCTGGCCCGGTATCGGCAAGTGGTTGATCGAAGCCATTGGCGCCCGGGACTACCCGGTCGTGCAAAACGGCATT CTGCTGATCGCCTGTCTGGTGATCCTGGTCAATTTCGTGGTGGATATCCTCTACGGCTTTGCCAACCCACGCATTCGTCACCAGCGCTGAGATCATCGAT
DNA Sequence for Gene
>IV03_RS05375
ATGAGCACCCCTACTCCTGCGGTAGCAGTCGATCAAAGCCTGCTTTACCCATCCCCGTACAAAGAATTCTGGCAAGCCTTCTCGAAAAACAAAGGCGCGG TTGCCGGCCTGCTGTTCATGACCCTGATCGTGTTCTGCGCCCTGTTCGCGCCCTGGGTTGCCCCCCATGACCCGAGCGAGCAATACCGCGACTTCCTGCT GACGCCTCCGGTGTGGCTCGAAGGCGGTCAATGGCAATTCATCCTCGGCACCGACGAACTGGGGCGCGACCTGCTGTCACGCCTGATCCAGGGCTCTCGC CTGTCGCTGCTGATCGGCCTGGCGTCGGTGGTCATGTCGCTGATCCCCGGCATTCTGCTGGGCCTGCTGGCGGGCTTCTTCCCGCGCATCCTGGGCCCTT CGGTCATGCGTCTGATGGACATCATGCTGGCCCTGCCCTCGCTGCTGCTGGCTGTGGCCATCGTGGCGATTCTCGGCCCTGGTCTGATCAATACCGTGAT CGCCATCGCCATCGTGTCGCTGCCTTCCTATGTTCGTCTGACCCGCGCTGCGGTGATGGGCGAGCTGAACCGCGACTACGTGACGGCTGCCCGTCTGGCC GGCGCCACCCTGCCGCGCCTGATGTTCATCACCGTGCTGCCCAACTGCATGGCACCGCTGATCGTTCAGGCCACCCTGAGCTTCTCCTCGGCGATTCTCG ACGCCGCAGCGCTGGGCTTCCTGGGCTTGGGCGTACAGCCACCGACGCCTGAGTGGGGCACCATGCTCGCCTCGGCGCGCGACTACATCGAACGTGCCTG GTGGGTCGTGAGCCTGCCCGGTCTGACCATTTTGCTCAGCGTGCTGGCAATCAACCTGATGGGCGACGGTCTGCGCGATGCGCTGGACCCGAAACTCAAG AATGCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGAGATTCGCATGTCACTTCTTGAAATCAAGAATCTCAACGTCCGCTTCGGCGACGCCAAGGCCGTACCTGTTGTGGACGGCCTGTCCCTGAGCGTCGAA AAGGGTGAAGTACTGGCCATCGTCGGCGAATCGGGTTCCGGTAAATCGGTGACCATGATGGCGCTGATGGGGCTGATCGACTCCCCCGGTATCATCACCG CCGATGCGCTCAATTTCGACGGCAACGACCTGCTCAAGCTCAACTCCCGGCAGCGTCGACGCATCATCGGCAAAGACCTGGCGATGGTCTTTCAGGACCC GATGACCGCTCTGAACCCCAGCTATACCGTGGGCTTCCAGATCGAGGAAGTGTTGCGCCAGCACCTGAACATGTCGGGCAAGGCCGCACGTCAGCGCGCA CTGGAACTGCTGGAAAAGGTCGAGATCCCTGGCGCCGCTGCGCGCCTGAATGCCTACCCGCACCAATTGTCCGGCGGTATGAGCCAGCGTGTGGCAATTG
Amino Acid Sequence
>dipeptide ABC transporter permease
MSTPTPAVAVDQSLLYPSPYKEFWQAFSKNKGAVAGLLFMTLIVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGQWQFILGTDELGRDLLSRLIQGSR LSLLIGLASVVMSLIPGILLGLLAGFFPRILGPSVMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLA GATLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK NAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site