Pseudomonas syringae UB0390, IV03_RS06475

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00834
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 114 126 2.0E-52
Pfam PF13180 PDZ domain IPR001478 PDZ domain 279 368 1.9E-16
PANTHER PTHR22939 SERINE PROTEASE FAMILY S1C HTRA-RELATED - - 392 476 1.2E-96
FunFam G3DSA:2.30.42.10:FF:000037 Periplasmic serine endoprotease DegP-like - - 275 376 7.6E-33
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 317 329 2.0E-52
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 392 479 9.2E-14
SMART SM00228 pdz_new IPR001478 PDZ domain 277 359 2.5E-13
CDD cd00987 PDZ_serine_protease - - 392 477 1.41067E-15
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 275 375 4.9E-28
CDD cd00987 PDZ_serine_protease - - 277 366 2.18462E-25
SMART SM00228 pdz_new IPR001478 PDZ domain 391 470 1.6E-7
Pfam PF13365 Trypsin-like peptidase domain - - 105 238 1.1E-34
NCBIfam TIGR02037 JCVI: Do family serine endopeptidase IPR011782 Peptidase S1C, Do 32 477 0.0
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 388 481 1.7E-17
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 135 155 2.0E-52
Gene3D G3DSA:2.40.10.120 - - - 30 270 8.5E-85
Pfam PF13180 PDZ domain IPR001478 PDZ domain 393 472 4.0E-9
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 248 372 8.23E-23
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 209 226 2.0E-52
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 231 248 2.0E-52
FunFam G3DSA:2.40.10.120:FF:000007 Periplasmic serine endoprotease DegP-like - - 31 270 4.8E-99
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 6 286 2.02E-70
MobiDBLite mobidb-lite consensus disorder prediction - - 77 98 -
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 175 199 2.0E-52
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 246 395 7.4E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.