Pseudomonas syringae UB0390, IV03_RS08295

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig33.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGATCAGCAACGCGCTGTTCAGGCGCGCATGAAAGGCGTCCTCCCGGTCAGTCGCGAGGCTGCCGAATTACTTGCGCAGCGCGGCCTGATGCCGGTGCCC GGCGGCTATACCTGGCGCAGTGACGGTCGCCTGACATTGCCTTCTGCGATACGTCTTACACATCAGCAGGCGATGTCTTTCGTCAACGCTATCCGTTGCC CGACGCAACTGCTGGTCGCTACGGGCGGCATGCTGGCGAAAAACCAGCTCATGCTGTCCGGTCTGCCTTTCGACGTCGTGCAGCTTGAGGGTGGCCATCA CCTGCACCTGGACGATGAGCAGGGTGCAAGCTCTGTTGCACACTGTATCAATCGCTTCTTCGCTGCTTCTTGACTTGAGCCCGGCAACTGCCGACGCTGG GCGGGTTGAAACAGGAGTCAACCGTGATGGATCAATCTGCAGCCTCTCGTGACCGCCTTGCCGGCGATCTTTTATATTTTCGTTCCCTGCTTGCCTGCCA
DNA Sequence for Gene
>IV03_RS08295
ATGAGAGCACTCATGCGTTTATCAAGTGTTCCCGTTGTCGCCTTGTGCCTGTCGATGTTCAGCGCCGGGCTCTGTGCCGCCGATGCGCCAGGCAGCAGTG ATCTGCAGATTCTGCCACGCCTGGCGGACACGGAAATCGTCGATTATCGTCCGGCTGCCGAGCTTGAGCGCGTCTACCCGATGGGTTCTATCCGCAAGAT CAGCGGCCAGTTGCGTTTCGATGGCCAGGTCAGTGCGCGGGGCACTCTGACGGCGGTCACCTATCAATTACCTGTCGAGCGGACTTCCGACGACGCTTTC GCCGCAGCTCGCGAAACCTTGCAGCAGCAGGGCGCCGAGCTTCTGTTCTGGTGTCAGGCGCGCGACTGCGGAGAAAGCAGCCTGTGGGCCAACGAAGTGT TCGGCAACGCCAAACTGTATGGCGCGGATGACCGCCAGGCTTACCTGCTGCTGCGTCTGGCAGAACCGCACAGTGACACTCTGGTAGCGCTTTACAGCAT CACCCGTGGCAACCGCCGCGCCTACCTGCACGTCGAGCAGTTTGAATCCTCCGCGCCACTGGGCGAACTGCTGCCGACCTCGGCCACCTTGCTGCGCCAA TTGCGAAGCACCGGCAAGCTGGAACTGCCCCGCCTGAGCGGCGAACCACAGGATGCCTGGGTCACCCTTGTTTCCCGCGCCCTGAACCTCGACAGCAGCC TGCGCGCCACGGTGTCCGGGCCCAGTGCCGGCGCCTGGCTTGAGGCCCTGATCGCCAAAGGCGTTCGCGCCGCCCGGCTCGAGGCAGGCGTCAATGAAGG GAAGGGGCTCAAGATCGAGGTTATCCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACAGCGATGGCGGACAGGCAGGTTCGCCATTATGCTCGCTCCCTCCGATCCTTTTTAGTGAATAGCGCATGTTCAACAATGACCGTCTGTTGGTGCAGA TTCTGCTGCTGGCGCTGTTCGGTGCCTGTCTCTGGGTGATGGCGCCGTTCTGGTCGGCGCTGGTATGGGGCGCGGTGCTGGCCTTCGCCAGCTGGCCGCT GATGCGTTTGCTGACCCGCTGGTTCAAGGGTCGAGAGTCGCTGGCTGCGTTGGTGATGTGCCTGTGCTGGATGCTGCTGGTCGCGGCGCCGCTGGTGTGG CTGGGTTTCAATCTCGCCGACCATGTGCGTGACGCAACCGGCCTGATCAAAGACATTCAGGTCGACGGCTTGCCTGATCCACCGCAATGGCTGGCAGGTA TTCCGCTGGTGGGCGAACGGCTGGTAGCGCTGTGGACCACCATCGATCAGCAAGGCGCGGCGTTCATGGCGACGCTCAAACCACACCTGGGGCAGGTCGG
Amino Acid Sequence
>lipoprotein
MRALMRLSSVPVVALCLSMFSAGLCAADAPGSSDLQILPRLADTEIVDYRPAAELERVYPMGSIRKISGQLRFDGQVSARGTLTAVTYQLPVERTSDDAF AAARETLQQQGAELLFWCQARDCGESSLWANEVFGNAKLYGADDRQAYLLLRLAEPHSDTLVALYSITRGNRRAYLHVEQFESSAPLGELLPTSATLLRQ LRSTGKLELPRLSGEPQDAWVTLVSRALNLDSSLRATVSGPSAGAWLEALIAKGVRAARLEAGVNEGKGLKIEVIR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site