Pseudomonas syringae UB0390, IV03_RS10140

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig23.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GACCAACCTCAACCTTGAAGACATGGTGCGCAGCGGACGTTTCCGTGAGGATCTGCTGTACCGCCTGAACGTGATCACCCTGAATCTGCCGGCCTTGCGT GAGCGCAGCGAAGACATTCTGACCCTCGCAGACCGCTTTCTGGCGCGTTTCGTCAAGGAGTACGCCCGTCCGGCCCGAGGCTTCAGCGAAGAGGCCCGTG CTGCGCTGCTCAATTACCGCTGGCCGGGCAACATTCGCGAGCTGCGCAACGTGATCGAGCGTGCCAGCATCATCTGTCCGCAGGAGCGCGTGGAGGTCAG TCATCTGGGCATGGCTGAACAACCGACCAACAACGCACCGCGGGTGGGAGCGGCCTTGAGTCTGGACGAGCTTGAAAAGGCACACATCGGGGCCGTACTG GCAACCAGTGAGACCCTTGATCAGGCCGCCAAGACCCTGGGTATCGATGCTTCGACGCTTTACCGCAAACGAAAACAGTACAACCTATGAAATACCTCAA
DNA Sequence for Gene
>IV03_RS10140
ATGAAACTGGCCATGAAGCTGCGCACCCGCCTCTTTCTGAGCATTTCGGCGCTTATCACGGTCGCTTTGCTCGGACTGCTGCTGGGGCTCGTCAGTGTCA TGCAGATGGCCCGGACTCAGGAATCACTGATTCAGCATAACTTCGCCATCCTCGATCTGGGCCTTAAGTTGCGCCAGAACATGGGTGATCAGTTGGTGTT GATGACCGGTTCCAATCGCAATGAGCCTGAGCTGGAAAGAATCCAGAAGCAGTTCGAAGAGCTGCTGGAAGAGGGGTCGGCGCAGGACACCCAGCAAGAT GTGCGCAACGGTTTTGAAAAGACCCGAGGCGATTATCAGCGATTCATTGCGGCCTGGCAGCAGTATGGCAATGATCCGCGAGGCATACGCGGTAACGCGC AACTGAGCGAAAGTTTCGACACTCTGCGTAACGGTCTGATGGATGTGCATCGCAAGGCGCTGGAGAACATCAGCAACGCCGAGATCAATTCCAGGGATCG TGCATTGTGGATCGCCGGCTTGCTGGGCCTGGTCGGGCTGGCTGTGCTGTGCATCGGCTTTGTGACCGCGCATGGCATCGCCCGTCGTTTCGGTGCGCCG ATCGAGGCGCTGGCCAAGGCTGCCGATCGCATCGGTGAGGGGGATTACGAGGTCACGCTGCCGATTTCCTCGGCCGCTGAAATGAACCTGCTGACCCGGC GCTTCGGCATCATGGCCGAAGCCCTGCGTCAGCATCAGGCGACCAACGTCGATGAGCTTCTGGCGGGCCAGCAGCGCCTGCAAGCGGTTCTCGACAGTAT CGACGATGGCCTGTTGATGATCGATCGCCAGGGCCATTTGGAGCACCTGAACCCGGTTGCGCAGCGCCAGCTCGGATGGGACGAGAGTCGCCTCGGGCAC AGTCTCGGCGAGGCGTTGGGCCGTCCCGAGCTGGATGAGCAATTGCATCTGGTGCTGCGGGGCGGAACGCTGGAACGCGCGCCGGAAGACCTGGCCATCG AAATCGACGGCGAGTCGCGCCTGTTGACCTACAGCATGACGCCGGTCAGCCACACCAAGGGCCACATCCTGGGGGCGGTGATGGTGCTACACGACGTGAC CGAGCAGCGTGCTTTCGAGCGGGTACGTAGCGAGTTCGTCCTGCGGGCCTCGCATGAGTTACGCACGCCGGTCACCGGCATGCACATGGCGTTCGGCCTT CTTCAGGAGCGTCTGCACTTTGCCCCCGAGTCCCGCGAGGCCGATCTGCTCAATACGGTCACCGAAGAAATGCAGCGCCTGATGCAGCTCATCAACGACC TGCTGAATTTCTCGCGTTACCAGAACGGTCTGCAGAAGCTCAAACTCGCGCCATGCTCCATCGAGACCTTGTTGCAAGAAGCCAAGGCGCGCTTCGAGGA TCAGGCCCAGGAACAGGATATCGTGCTGATGCTGGATATGCAGGAGCCGATGCCGCGCCTGCATGCCGATCAGTCCCAACTGGAGCGGGTGCTGGATAAT CTGCTGGACAATGCGTTGCGTCACACGCCGCCCAACGGCCTGATTCGCCTGCAGGCCAGGCGTCACGGCGAGCGGGCGATCATCAGCGTCGAGGATAACG GCGAGGGCATTGCCTACGGACAGCAGGGGCGGATCTTCGAACCCTTCGTCCAGGTCGGTCGCAAGAAAGGCGGTGCCGGACTCGGGCTTGCGCTGTGCAA AGAGATTGTCCAGCTGCACGGCGGGCGCATGGGCGTTTATTCCCGGCCGGGGCAGGGCACGCAGTTCTACATGGCTTTACCGCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGCTTGAGCGCCAAGCCCTCACTCACTTCAATTCGAGTGATTGAGCACCTGCAGAATGGCCGCGCTCTGTGCGTCAGGCTCGCCGTCGAAGCGTGCCGG ACGATAGTGCATCTGGAACGCGGCCAGTACCTGACGTGTCGCGACGTCCAGCTCGCCGGTCTGCGGGGTGCTATAGCCCAGGCGCGCCAACTGCTGCTGG AACCAGCTGATGCTCGGCAGGTTGACTGCCAGCTGTGCCTGACGCTGGGCAACCTGGCGTTCGTCCGGCCAGTTTCCCAGACCTTCGGCAGCGAGGCGTT TCCACGGGAACAACGGTCCCGGATCCTGCTTGCGCAGCGGGGCGATGTCGCTATGACCGATGATGTGTTTGGGGTCGATCCTGTTGCGTTTGACGATGTC CTTGAGCAGGACAATGATCGATTGGGTCTGTGCTTCAGTATACGGATACCACAGGCGACCTGTCGGCGTTTCCTTGAAGCCCGGATTGACGATCTCGATG
Amino Acid Sequence
>histidine kinase
MKLAMKLRTRLFLSISALITVALLGLLLGLVSVMQMARTQESLIQHNFAILDLGLKLRQNMGDQLVLMTGSNRNEPELERIQKQFEELLEEGSAQDTQQD VRNGFEKTRGDYQRFIAAWQQYGNDPRGIRGNAQLSESFDTLRNGLMDVHRKALENISNAEINSRDRALWIAGLLGLVGLAVLCIGFVTAHGIARRFGAP IEALAKAADRIGEGDYEVTLPISSAAEMNLLTRRFGIMAEALRQHQATNVDELLAGQQRLQAVLDSIDDGLLMIDRQGHLEHLNPVAQRQLGWDESRLGH SLGEALGRPELDEQLHLVLRGGTLERAPEDLAIEIDGESRLLTYSMTPVSHTKGHILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGL LQERLHFAPESREADLLNTVTEEMQRLMQLINDLLNFSRYQNGLQKLKLAPCSIETLLQEAKARFEDQAQEQDIVLMLDMQEPMPRLHADQSQLERVLDN LLDNALRHTPPNGLIRLQARRHGERAIISVEDNGEGIAYGQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYMALPL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site