Pseudomonas syringae UB0390, IV03_RS10150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 365 | 688 | 1.4E-67 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 318 | 343 | - |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 531 | 687 | 5.86742E-61 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 528 | 688 | 8.5E-50 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 524 | 689 | 9.5E-52 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 169 | 284 | - |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 530 | 686 | 4.9E-45 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 519 | 690 | 1.8E-57 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 521 | 689 | 8.5E-57 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 535 | 687 | 1.49E-47 |
| Coils | Coil | Coil | - | - | 414 | 434 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.