Pseudomonas putida S16, PPS_1927
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida S16 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGACGAACTCAAGGCCGCCGCCGTGGCCAAGCACCCGGGTGCCACCGTCACCGACTCGGAACTTGAAGATGAGTACGGTCGCTACGTCTACAAGGTCG AGCTGCGCGACACGCAGAACGTCGAATGGGACGTGGCGCTGGACGCCAAGACCGGTGAAGTGCTGAAGGACGAGCGGGACAACTGATGATCCACCTACTG CGGCCGGCGCGCTACTTCGCGCTGGCGCTGCTGGCCGTCTGTTCCCTGGCCGTTGCCCGTGACCTTGATCAGGACGAAGCCCTGGAACTGCGCCAGAAGG GCATCATCCTGCCGCTCGAGCATCTGTTGGAGACCGCCCTGGGGCGTCACCCCGGGGCGCGCCTGCTGGAGGCCGAGCTGGAAGAAGACGACAATCGCTA CGAATACGAAGTCGAGTTGCTGACAGCTGAAGGCGTGGTGCGCGAGATCAAACTCGATGCCAGCAGCGGTGCCCTGCTAAAAGACGAGGAAGACGACTGA
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| DNA Sequence for Gene |
>PPS_1927
ATGCGCCTGTTGCTTGTCGAGGACAATGTACCGTTGGCCGATGAACTTACCGCAGGCCTGCAGCGCCAGGGCTACGCCGTGGATTGGCTGGCCGATGGCC GCGACGCGGTGTATCAGGGCCAGAGCGAACCCTACGACCTGATCATCCTGGACCTTGGCCTGCCGGGCCTGCCGGGCCTGGAAGTGCTGGCCCAGTGGCG TGCCGCCGGCCTGGCCACGCCGGTGTTGATCCTTACTGCCCGTGGCTCGTGGGCCGAGCGTATCGAAGGGCTGAAGGCCGGGGCGGATGACTACCTGAGC AAACCCTTCCACCCCGAAGAACTGCAGCTGCGCATCCAGGCGTTGTTGCGCCGTGCCCGTGGCCTGGCCAACCAGCCAACGCTGGAAGCGGCCGGCCTGC ACCTGGACGAAAGCCGGCAGTGCGTGAACCGTGACGGCGTGGATATCCAGCTGACCGCCGCCGAGTTCCGCCTGCTGCGCTACTTCATGCTGCATCCGCA GCAGATCCTGTCCAAGAGCCACCTGGCCGAGCACCTCTACGACGGTGAAACCGAGCGCGACTCCAACGTGCTGGAAGTGCACGTCAACCACTTGCGACGC AAGCTGGGCCGCAGCGTCATCGAGACCCGCCGCGGGCAGGGCTACATCTACGCCGGGAGCGCCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTCGATCCAGGCGCGCCTGAGCCTGGGCCTGGTGGCGGTGCTGGTGGTGGTCGGCCTGGTGCTGGCGCAGCTGACCCTGTGGTTGTTCGAGGTCGGCCT GCAGCGCTACCTGGAGAATGGCCTGCGCAAGGAAAGCGAAAACCTGTTGGTGGCCCTGGTGCGCGGGCCTTCGGGTCTGCAGCTGGATGAGCGGCGTATC TCGGCCGCCTACCAGCGGCCGTTTTCCGGCTATTACTTCCGCATCGATTTCGATAAAGGCACCTGGCGTTCCCGGTCGCTGTGGGATCTGGACATGCCCA AGCCCGCCGCGCCGGGCCTTTCCGACAGCCACGAACTCGGCCCGGAAGGCCAGCAACTGCTTGCCCTGCGTGCTGACTACCGGCGCCTGGGCCAGGACAT CTCGATCAGCGTGGCACAGGATTATTCACCGGTACGCGAAGGTTTCCGGCGCCTGCAGCAGATCGGCCTGGGCATGGGCCTGGTGGCGCTGATCCTGGTG
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| Amino Acid Sequence |
>two component winged helix family transcriptional regulator
MRLLLVEDNVPLADELTAGLQRQGYAVDWLADGRDAVYQGQSEPYDLIILDLGLPGLPGLEVLAQWRAAGLATPVLILTARGSWAERIEGLKAGADDYLS KPFHPEELQLRIQALLRRARGLANQPTLEAAGLHLDESRQCVNRDGVDIQLTAAEFRLLRYFMLHPQQILSKSHLAEHLYDGETERDSNVLEVHVNHLRR KLGRSVIETRRGQGYIYAGSAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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