Pseudomonas putida S16, PPS_1906

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida S16 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCGCCAACTGGTCATTGCTGGTGGCCTTGGTCCCCACCAGCAGCCAGTCGCAGGGCGGCATGTCGGTGGCACTGGCATAGGCCTGCACCTTCATCTGCA AGTTGCCATGCACGGCACTGTCCAGGGCCAGCCCCTGCTCGCGGACAACCTCGTACTCGCTGCGCAAAAGAAAATGCACATCGAAGCCGGCCCGGGCCAG CATCAACCCATAGAAGCCGCCGATGGCGCCACTGCCGATGATGCCGATACGTGGTGTGTGCGGATGCATGCCGATCTCCTGGTAAAAGTCAGCCCTCTTT TTACACAGGTTGCGCGGCGCTGGGCAGCCCATGCTCGGCAAACACCTGCCATCTCGGAAAAACCCCACACGGACTGGGCCCAGCCCATTGTCGCGCCACC TGTAACGCGCTAAGGTTCGGCTCCCCGCTGCGATTATTCTTGCTGCTGGGCCGCACGGGGATAGTTGGCGGCCGGCACCCGTGACCTGACGAGTAACACG
DNA Sequence for Gene
>PPS_1906
ATGGCTGATTTACCGATCGATGACTTGAACGTTGCCTCCAACGAGACCCTGATCACACCCGATCAGCTCAAGAAGGAAATCCCCCTCAGCGCCAAGGCCC TGCAGACCGTGACTGCCGGCCGTGAAGTGGTGCGCAATATTCTCGACGGCAAGGACCATCGCCTGTTCGTCGTGGTCGGCCCTTGCTCGATCCACGACAT CAAGGCCGCCCACGAGTACGCCGAGCGCCTGAAAGTGCTGGCCGAGGAAGTGTCCGACACGCTGTACCTGGTCATGCGCGTGTATTTCGAAAAACCGCGT ACCACCGTCGGCTGGAAAGGCCTGATCAACGACCCGTACCTGGATGACTCGTTCAAGATCCAGGATGGCCTGCACATCGGCCGCAAGCTGCTGCTGGACC TGGCCGAAATGGGCCTGCCGACCGCCACCGAAGCGCTCGATCCTATTTCTCCGCAGTACCTGCAGGACCTGATCAGCTGGTCGGCCATCGGCGCCCGTAC CACCGAATCGCAGACCCACCGCGAGATGGCTTCGGGCCTCTCCTCGGCAGTCGGTTTCAAGAACGGCACAGACGGCGGCCTGACCGTTGCCATCAACGCC CTGCAGTCGGTATCCAAGCCACACCGCTTCCTCGGCATCAACCAGGAAGGCGGCGTGTCGATCGTCACCACCAAGGGCAACCCGTACGGCCACGTGGTAC TGCGCGGCGGCAACGGCAAGCCGAACTACGACTCGGTCAGCGTCGCCCTCTGCGAACAGGACCTGGCCAAGGCCAAGATCAAGGCCAATATCATGGTCGA CTGCAGCCACGCCAACTCCAACAAGGACCCGGCCCTGCAACCACTGGTGATGGAGAACGTCGCCAACCAGATCCTCGAAGGTAACCAGTCGATCATCGGC CTGATGGTCGAGAGCCACCTGAACTGGGGCTGCCAGTCGATTCCGAAGAACCTGGACGAGCTGCAGTATGGCGTGTCGATTACCGATGCCTGCATCGACT GGTCGGCTACCGAGAAGACCCTGCGCAGCATGCGTGCCAAGCTTAAGGATGTGCTGCCGCAGCGTAAGCGCGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCAATAAAAGAGCGGGGCCGCTTCGCGCCCCATTCGCGGCACAAGGCCGCTCCTACAGGGTTATGCGATTTCCTGTAGGAGCGGCCTTGTGCCGCGAAT GGGGCGCGAAGCGGCCCCGCTTTTTTTACAGAATCAGACCTTGCTCGAATGCCGCTGCTGGCGCTCCATGTAGCGTTCCACGTACGAGCAGGACGGAATC ACCGTGTAGCCCATCTGCTCAGCATACTCCAGGGCCCGCTCGGTCAGGGCGGCAGCAATCCCGCGGCCGCGCAGGGCGTTGGGTACGAAGGTGCGATAGA TGTCCAGCGTCTGTTTGCCCAGATCCATGTACGTCAGATAGGCACGATGACCGTCCACGCTGGTCTCGAACTGATGACCGGCCTGGTCATGATGGATGGT CAGCGCTTCGCTCATCACTACTCCTCGCAGGTCTTCTCGGCAGACCCATACCTTAACCGATGGTGGTTTATCCGGCACAGAATCCTCTACGCCACCTGTT
Amino Acid Sequence
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPIDDLNVASNETLITPDQLKKEIPLSAKALQTVTAGREVVRNILDGKDHRLFVVVGPCSIHDIKAAHEYAERLKVLAEEVSDTLYLVMRVYFEKPR TTVGWKGLINDPYLDDSFKIQDGLHIGRKLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGGLTVAINA LQSVSKPHRFLGINQEGGVSIVTTKGNPYGHVVLRGGNGKPNYDSVSVALCEQDLAKAKIKANIMVDCSHANSNKDPALQPLVMENVANQILEGNQSIIG LMVESHLNWGCQSIPKNLDELQYGVSITDACIDWSATEKTLRSMRAKLKDVLPQRKRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site