Pseudomonas syringae UB0390, IV03_RS11565

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig21.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGAAGGATGACCTCGAATCTCCTTGCCGGGCCGATTGCAGCAATTCTCGCATCACTATATGCTGCGCCCCAGATTCGAAAAAAACACTACATAAGGGAT TTACGCCTCGACATCGCGCATTCACGAGCCGGTTCACCGGACGGCGAGATTATCGAAAAACAGGTGTAATTCCCGCATCAAAGTCAGTCACGCACGCACA AGAGCCGGAGAAAATCTGTATAATCCGCGCTAGCTCAAGGGTACTCAAATGACCATTTGCAAAAGCAAACCTGGCTTGTCTGAAAGCAACCTCGAGTTTT CGATCTGCTCGCCTGTGAGGCACAGCCTCGGCAGCACATTCAAAGAGCGACCGGCACACTCATAAGCCGGCCGATCGCGACAACAGACCCCGAGTAAAAA ATTCCATTGCCAGCGCACGTTCAGCGCGACGCTGGCAGCCCATACTTTGAAAATCCAACAGGGGTGCCACAGGCAACCCCTCAGGCAGGAGACGTACACC
DNA Sequence for Gene
>IV03_RS11565
ATGCTGAGCTGGGACGAATTCGATAAGGAAGACGGCGAAGTAGTCGCCAAAGCGACCAACGCCGGTCATGCCAACGAAGCCAACATGGACCGCCTCGACA GCGCCGGTGGCCTGGCTGCACAGGAAGCCCGCGCAGTAACCGCCGCCGACTCCGCTGCCCTGATCCGCGCCAAGAAAGCGCTGGACGCACTGGACGTCGC TGAAGGCCTGGCCGAACTCGAAGGCGCCAGCGCCCGCGTCGCCGTTGATGAAAAAATGATGATCAACTGCCGCGCCGACCTCAACCAGCTCGTACCTTTC AAGTACGACTGGGCCTGGCAGAAGTACCTGGACGGTTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAAACC CCGAAGGCCTGACCGACGATGAGCGCCGCATCGTCATGCGCAACCTGGGCTTCTTCTCCACTGCCGACTCGCTGGTTGCCAACAACCTGGTGCTGGCCGT GTACCGCCTGATCACCAACCCGGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAATCG CTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCATCGGTCGCTAAAAAAGCAGCCTGGGGCCTGAAGTACACCCGTTCGATCTCCG ATCCGAAGTTCGAAACCGGCACCGTCGAAACCGACAAAGAGCTGCTGCGCAACCTGATCGCCTACTACTGCGTACTGGAAGGCATCTTCTTCTACTGCGG CTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAGATGACCGGCGTCGCCGAGCAGTTCCAGTACATCCTGCGCGACGAGTCCATGCACCTGAACTTC GGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCGCACCTGTGGGATGCCGAGATGAAAGAAGAAGCCACGCAGATGATCCTGCAAGGCACCCAAC TGGAAATCGAATACGCCCGCGACACCATGCCCCGCGGCGTACTCGGCATGAACGCAGCGATGATGGAGGACTACCTGAAATTCATCGCTAACCGTCGTTT GAGCCAGATTGGGTTGAAGGAAGAGTATCCAGGGACGACCAACCCGTTTCCTTGGATGAGTGAAATTATGGACTTGAAGAAAGAGAAGAATTTCTTTGAG ACGCGGGTTATTGAGTATCAGACGGGTGGGGCTTTGAGCTGGGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGTCTCGCCCCACTTGTCACGAAGCATTGACACGTTGTCACGATGACTTAGCACGCCAGCTTCCGATTCGTCCAAGCCTGATTTTTTCAGGCTTTCGGA TCGGGTTTAAGCTTTGACTAGAATAGCTGCAACGAAGCGCTGAAGGACTGTGTTGCGGCTATCTGCTGGTAGTGAAAGGAGTGGTAGCACCAAAATATCA TACGAAAGCTAAGCGATAGACTCGGCGTTTTTTTCGTTCATCTGGGTTGACTAAGGGCCGCACGCACCCAGCATCCTGATTCATCGCCGGAGCTTCAGGG AAATAAGTTAGATGGAAAAAGCCAAGACTTGTTAATTAGGTGCTATTTGGAAGCCGATATTTTTTCCATCGTCGACTTCACCAAGTCCAATGGGGAGCTA TTGAGTGCTACCGCAAGAGCAAAGATGGTAGCTAACGTCGGTTGGTGATGACCTCGCTCCATAAGACTCACATAGTTGCGCTGCAACCCAGCTTGGGCAG
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDGEVVAKATNAGHANEANMDRLDSAGGLAAQEARAVTAADSAALIRAKKALDALDVAEGLAELEGASARVAVDEKMMINCRADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNF GIDVINQIKIENPHLWDAEMKEEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site