Pseudomonas syringae UB0390, IV03_RS15120

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig11.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGACCTTCCTCTGGCGATGGGCAGTGATGCGGGGGTGGTCATCGAAGGCACGGTCAGCGCTTATGATCAGCATTACCAGTTGCTCACCGTGACGCTGC CCGACAGCAAACTGAGCATGCGCGTCGCCCACGCGCAGATGCAGGTCGGCACCCTGCTGCGCATCAAGGTCCAGGCCCGGGATGTCAGCCTCAACCTGCA ACCCGATTACCAGAGCAGCATCCTCAACCGCTTGCCGGTCACGGTGGTCGAGGAAGCGCTGGCCGACAATTCGGCGCACGTCCTGGTCAAGCTGGACGCC GGCGGCACGCCGCTGCTCGCGCGCATCACTCGCTATTCCAGTGACCAGTTGAACCTGCACAGAGGCCAGTCGCTCTGGGCACAGATCAAGGCAGTCGCAG TGCTGGCCTGACGTTTGGAAAAAAACAGCCACGCAGCAAATAAACGGCACCACCGGAAAAGGCCGAGGTCAGTGTTTTTAACTGCCTTTGGAACTTAGCC
DNA Sequence for Gene
>IV03_RS15120
ATGCCTGACTCGACTGCCATCAGCCAGCCCGCCAGTGAACTGCATTACGTAGACGACACTCAACCGGGCCTTACGCGCAAGGTACTGCGCGGCAAATTCG CGTACTTCGACACAAAGGGTCAGCGCATCAAGGACGAGTCGGAGATCAAGCGCATCAACGCACTGGCAGTCCCGCCCGCCTACACCGAGGTGTGGATCTG TGCCGACCCGCTGGGTCACCTGCAGGCCACCGGCCGCGACGCTCGCGGGCGCAAGCAGTACCGCTACCATCCGCGCTGGCGGGAAATACGTGATCAGGAC AAATACTCGAGACTGATAGAGTTCGGCCATGCACTGCCCAAAGTGCGCAAGCAGATCGAAGCACAGCTCGCTCAGCCAGGCATGGGCCGAGAAAAGGTCA TGGCGACGGTTATTTCATTGCTGGACGCGACCCTGATCCGCATCGGCAACAGCCAGTACGCCAAGGAAAACCGGTCGTACGGCCTGACCACCCTGCGCAA CAAACACGTTGAAGTCAAAGGCGGTCAGATCCTCTTCGAATTCCGTGGCAAGAGCGGCGTCGAGCACAAGGTCAGCGTCAAGGATCGACGTCTGGCCAAC GTGATCAAACGCTGCATGGAGCTGCCAGGACAAAACCTCTTCCAGTACCTGGACGAAGACGGCGTGCGCCACGCAGTAACCTCATCCGACATCAATGCCT ACCTGCAAAGCCTCACCGGCTCGGACTTCACCGCCAAGGACTACCGGACCTGGGCAGCCAGTGCGCTGGCGCTGGCAACGCTGCAAAAACTGCACTGGGA GCCAGAGGCCGACGCCAAACGGCACATCGTCGACATGGTCAAGGCCGTCTCGAAACAACTGGGCAACACCCCCGCCATCTGCCGAAAATGCTACATCCAC CCGGCGGTTCTGGAAGGCTTCCTGCTCGGCAACCTGGCCAAACTCCCCCGCTCCCGACAACGCAAAGGCCTGCGCCTGGAAGAAGTCGCCCTGGCGAGCT ATCTGCGAATACTGGCTGACAAGGTCGAGGCCGTGGTTAACGATGCGGTGGCGAAAGACAGCAAAGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCCTGATCACGGCACGTCAGCCTTTGCTCCAATAAAATTTCGTAGCCTCATGATTTGCCAAGCATTTCTGACGGATAAAAAAGCAGGGTCTTGCACC CTTCGAGACGCTTTCAAGCTTGCTTCATGGGGGCCGGGTGTATATATTCCCTGCTCTTGGCGCTACCGCCCCGATGGCGAAATTGGTAGACGCAAGGGAC TTAAAATCCCTCGTCCTTTGGACGTGCCGGTTCGACCCCGGCTCGGGGCACCATTTAAAATCAAGGGGTTAAGTGGCTTTAGTCACATACCCCTTGAGCT TCATGCTCCGCAATAATTAATGCTGCTCCGCAACTCGTCGTAAACCCTACCCTCCCGGCGTCCTGCCGACGAACACCACTCCCCAAATCTGAAGCACTCA ACTACTGTATGCCCATACAGCAATTGAGAATCACCCCCATGAACGAGAGCAACAGCTCAGAAGCCTTGGCCGAATGGCACAAAAGGCTCAACGACAGGAG
Amino Acid Sequence
>DNA topoisomerase
MPDSTAISQPASELHYVDDTQPGLTRKVLRGKFAYFDTKGQRIKDESEIKRINALAVPPAYTEVWICADPLGHLQATGRDARGRKQYRYHPRWREIRDQD KYSRLIEFGHALPKVRKQIEAQLAQPGMGREKVMATVISLLDATLIRIGNSQYAKENRSYGLTTLRNKHVEVKGGQILFEFRGKSGVEHKVSVKDRRLAN VIKRCMELPGQNLFQYLDEDGVRHAVTSSDINAYLQSLTGSDFTAKDYRTWAASALALATLQKLHWEPEADAKRHIVDMVKAVSKQLGNTPAICRKCYIH PAVLEGFLLGNLAKLPRSRQRKGLRLEEVALASYLRILADKVEAVVNDAVAKDSKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site