Pseudomonas syringae UB0390, IV03_RS15945

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig11.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCCAGATGAACTTTGTCGACAACCAGGTCAACCCGAGGACCGGCACCATTCGTGGCCGCGCCGTGTTCGATAACGCCGACGGTGCGTTTACTCCCGGCCT GTATGCGCGCCTGAAACTGGTGGGCAGCGGCACTTACTCGGCCGTGCTGATCAATGACGAAGCGGTGGGCACCGACCTGGGCAAGAAGTTCGTGCTGGTC ATGGACAAGGACAACAAGCCCGCCTACCGCGCTGTCGAGCTGGGGCCGAAAATCGAAGGCCTGCGCATTGTGCGCACTGGGCTGGCCAAGGATGACACCA TCGTCGTCAAAGGCTTGCAGCGCGTCCGTCCGGGCCAGCCTGTGGACCCTGAAGTCACCCCGATGGCCAGCGCCGACACCCTCGCCGCACTGCTCAAACA ACGCCAGGCCCTCGAAGCCAGCAACCTGCCACAAGTGGCGCCCAAAGCGGCCGTCAAAATCGCCAGCGCTGCCGCGCCGCGCGGCTAAGGGACTCGTCCG
DNA Sequence for Gene
>IV03_RS15945
ATGAACTTCTCCAAATTCTTTATTTCACGGCCGATCTTTGCCGCAGTGCTGTCGCTGCTGATCCTGATCGCCGGTGCCATCTCGCTGTTCCAGCTACCGA TCAGTGAATACCCGGAAGTCGTGCCGCCAACCGTGGTGGTACGCGCCAACTTCCCCGGCGCCAACCCCAAGGTGATCGGCGAAACCGTGGCCTCGCCACT GGAACAGGCGATTACCGGTGTCGAAGGCATGCTCTACATGTCCTCGCAGGCCACCGCCGATGGCAAGCTGACCCTCACCATCACCTTCGCACTGGGCACT GACCTGGACAACGCGCAGGTGCAGGTGCAGAACCGCGTGACCCGCAGCGAACCGAAGCTGCCTGAAGAAGTGACACGCATCGGCATTACCGTGGACAAGG CCTCCCCCGACCTGACCATGGTTGTGCACTTGACCTCACCGGACAAACGCTACGACATGCTGTACCTGTCCAACTACGCCGTGCTCAACATCAAGGATGA GCTGGCGCGACTTGGCGGCGTCGGTGACGTGCAATTGTTCGGCATGGGCGACTATTCGCTGCGGGTCTGGCTCGATCCGAACAAGACCGCCTCACGCAAC CTGACCGCCACTGATGTGGTCAATGCGATTCGCGAGCAGAACCGTCAGGTAGCGGCAGGCCAGCTGGGCTCACCGCCCTCCCCGAATGCCACCAGTTTTC AGATGTCGATCAACACTCAGGGCCGCCTGGTCAGTGAGGAAGAGTTCGAAAACGTGGTGGTGCGAGCCGGTGCCGACGGTGAAATCACTCGCCTCAAGGA TATTGCCCGCATCGAACTGGGCTCCAGCCAGTACGCGCTACGCTCGTTGCTCAATAATCAGCCCGCGGTAGCGATCCCGATCTTCCAGCGCCCCGGCTCC AACGCCATCGACATCTCCAACGATGTACGGGCACGGATGGCCGAGCTCAAGCAAAGCTTCCCGGAAGGCATGGACTACAGCATCGTCTATGACCCGACGA TCTTCGTCCGGGGCTCCATCGAAGCGGTGATTCACACGCTGTTCGAAGCACTGATCCTGGTGGTGCTGGTGGTAATCCTGTTCCTGCAGACCTGGCGCGC GTCGATCATCCCGCTGGTGGCAGTACCGGTCTCGTTGATCGGCACCTTTGCGGTCATGCACATGTTCGGGTTCTCGCTGAACGCACTGTCCTTGTTCGGC CTGGTACTGGCAATTGGTATCGTGGTCGACGATGCCATCGTGGTGGTGGAGAACGTCGAACGGAACATCGAGCTGGGCCTGGAACCGGTCGCCGCCACAC ACAAGGCCATGGCCGAAGTGACGGGACCGATCATCGCGACGGCGCTGGTGCTGTGCGCCGTATTCGTGCCTGCAGCATTCATCTCCGGGCTCAGCGGGCA GTTCTATAAGCAGTTCGCGCTGACCATCGCCATTTCGACGGTCATTTCTGCTTTCAACTCGCTGACCCTGTCGCCTGCACTGGCGGCGGTATTGCTCAAA GGGCATGACGCGCCCAAGGATCGCTTCTCGCGCTTCCTCGACAAAATGCTCGGCAGCTGGCTGTTCCGCCCGTTCAACCGTTTCTTCGAGAAAGCCAGCC ACGGCTATGTCGGCACGGTCGCCAGGGTCATTCGCAGCAGCGGCATTGCCTTGCTGGTCTACGCGGGCCTGATGGTTTTGACCTGGATGGGTTTTGCCAG CACACCGACCGGTTTCGTCCCGAGCCAGGACAAGCAATACCTGGTTGCATTTGCCCAACTGCCGGACGCCGCGAGCCTGGACCGCACCGAAGATGTCATC AAGCGCATGTCGGAGCTGGCCCTCAAGCAACCTGGCGTGCAGGACGCCATTGCCTTCCCGGGGCTGTCGATCAACGGCTTCACCAACAGCCCGAATAACG GTGTGGTGTTCGTGACCCTCAAGCCGTTCGACGAGCGCAAGGACCCGAGCCTCTCGGCCAATGCGATTGCCGGCGCGCTGAACGGTCAGTTCGCCTCGAT TCAGGAAGCCTACATGGCGATCTTCCCGCCACCACCGGTACAAGGCCTGGGCACCATCGGCGGCTTCCGCCTGCAGATCGAGGACCGTGGCAACCTCGGC TATGACGAGCTGTACAAGGAAACCCAGAACATCATCGCCAAAAGCCGCAGCGTGCCGGAACTGGCCGGGCTGTTTACCAGCTACACGGTGAACGTACCGC AGGTCGATGCCGCGATTGACCGCGAGAAGGCCAAGACCCACGGCGTGGCAGTCAGCGATATTTTCGACACCCTGCAGGTGTATCTGGGTTCGCTGTATGC CAACGACTTCAACCGGTTCGGCCGCACCTACCAGGTCAACGTTCAGGCTGAGCAGCAGTTCCGTCAGGATGCCGACCAGATCGGTCAGCTCAAGGTGCGC AATAACCTGGGCGAGATGATCCCGCTGGCGACCTTCGTCAAGGTCAGCGACACCGCAGGCCCCGACCGCGTCATGCACTACAACGGCTTCATCACTGCTG AAATCAATGGCGCGGCAGCACCGGGCTACAGCTCTGGCCAGGCTCAGGCGGCGGTCGAGAAATTGCTTCGTGAGGAACTGCCCACCGGCATGATCTACGA ATGGACTGACCTGACCTATCAGCAGATCCTTTCGGGCAATACCGCACTGTTCGTGTTCCCGCTCTGTGTATTGCTGGCGTTCCTGGTCCTGGCGGCGCAA TACGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTACCGATGACCCTGCTCTCGGCGATTGCCGGGGTGATGATCGCCGGCAGCGACAACAACA TCTTCACTCAGATAGGCCTGATCGTACTGGTCGGCCTGGCGTGCAAGAACGCGATTCTGATCGTCGAGTTCGCCAAGGACAAACAGGCGGAAGGGATGAG CCCGCTGGATGCGGTACTGGAAGCATGCCGCCTGCGTCTGCGGCCGATCCTGATGACCTCGTTCGCCTTCATCATGGGGGTCGTGCCCCTGGTGCTGTCC AGCGGCGCGGGTGCCGAGATGCGCCATGCGATGGGTGTCGCAGTGTTCTCCGGGATGCTGGGGGTCACCTTCTTCGGCCTGCTGCTGACGCCGGTGTTCT ACGTGCTTATCCGTAATTACGTCGAACGCCAGGAGGCCCGCAAGGCCGCCAGGATAAACAGCCAGCAAAACCTGCCTGCGGAGATGCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGCGCGTACAAAGTCTTCATCCCGAGCCTGCTGGTCATGGCACTGGCGGCCTGCGCCGTGGGCCCGGACTACCAGGCACCGGTCACGGCGCCAGCGAA GCTGGCGTCCGCAGCCCAGGGCAACTACGACCGCAGCAAAGTGGACCGGGTGTGGTGGCAGCAGTTCGAGGACCCGACCCTCAATAAGCTGGTGGCCAGG TCACTGGACGGCAACCGCGACCTGCGCGTCGCCTTCGCCAGGCTCAAGTCGGCGCGAGCCATTCGCGATGACGTCGCCAACGATGTAATGCCGGTAGTGA CCAGCCGTGCCAGCAGCGACATCGGCAAGGGTCAGCAACCCGGCATCACCGAGCGCCGGGTCAATAGCGAGCGCTACGACCTGGGCCTGGACATGGCGTG GGAAGTGGACCTGTTCGGACGTATCCAGCGCCAACTGGAGGCCAGCGATGCCGATCAGGAAGCTGCAGAGGCCAACCTCTATCAGCTTCAGGTCACGCTG
Amino Acid Sequence
>transporter
MNFSKFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVASPLEQAITGVEGMLYMSSQATADGKLTLTITFALGT DLDNAQVQVQNRVTRSEPKLPEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAVLNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTATDVVNAIREQNRQVAAGQLGSPPSPNATSFQMSINTQGRLVSEEEFENVVVRAGADGEITRLKDIARIELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIDISNDVRARMAELKQSFPEGMDYSIVYDPTIFVRGSIEAVIHTLFEALILVVLVVILFLQTWRASIIPLVAVPVSLIGTFAVMHMFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIELGLEPVAATHKAMAEVTGPIIATALVLCAVFVPAAFISGLSGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK GHDAPKDRFSRFLDKMLGSWLFRPFNRFFEKASHGYVGTVARVIRSSGIALLVYAGLMVLTWMGFASTPTGFVPSQDKQYLVAFAQLPDAASLDRTEDVI KRMSELALKQPGVQDAIAFPGLSINGFTNSPNNGVVFVTLKPFDERKDPSLSANAIAGALNGQFASIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLG YDELYKETQNIIAKSRSVPELAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQVYLGSLYANDFNRFGRTYQVNVQAEQQFRQDADQIGQLKVR NNLGEMIPLATFVKVSDTAGPDRVMHYNGFITAEINGAAAPGYSSGQAQAAVEKLLREELPTGMIYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAIAGVMIAGSDNNIFTQIGLIVLVGLACKNAILIVEFAKDKQAEGMSPLDAVLEACRLRLRPILMTSFAFIMGVVPLVLS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYVLIRNYVERQEARKAARINSQQNLPAEMH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site