Pseudomonas syringae UB0390, IV03_RS19890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig5.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGTGGAGATGGCAGAAGCTGCCGAGCGAACGGCCGCCCAGCGCCTTGGGCACTTCCAGGGGCAGGTCAACCTTGCCAACAACAAGCTGCAGGAGCTTGA CCAGTTTCGTCAGGATTATCAGCAGCAATGGTTGGAGCGCGGCAGCGCCGGGGTTTCCGGACAATGGCTGCTGGGTTATCAACGCTTTCTCAGTCAGCTC GATGTTGCGGTTGCACAGCAATACAAAAGTCTCGAATGGCACAAGGCCAACCTGGATCGGGCGCGCAGCGCCTGGCAGGATTGCTACGCGCGGGTAGAGG GCTTGCGCAAGCTGGTGCAGCGGTACATGGACGAGGCGCGCAGGCTGGAGGACAAGCGTGAGCAGAAATTGCTCGACGAATTGTCGCAGCGCCTGCCTCG CCATGAACAATTCTGACGTTTGACTCAATCAGACCCGCAGTGATCTCTCTGGCTGGTCTACGCTATCAATGTCTCGGTGATGAAACACCTCGAGGTTCCC
DNA Sequence for Gene
>IV03_RS19890
ATGACTGTCACTTCCGAACGTTCTGCCGATGGCCAGACACTGACCCTTTATATCGAAGGGCGCTTCGATTTCAACTCCCACCAGGCATTTCGCACTGCCT ATGAGGACTACCCGCAATCACTGAGCTACGTGGTCGACCTGCGCGGTACTCATTACCTGGACAGTTCTGCGCTGGGGATGCTGTTGCTGCTGCGCGATCA CGCCGGAGGTGACAAGGCACTGGTGCGCCTGGTCAACTGCACGCCTGATGTGCTGAAGATTCTGGCCATTTCCAATTTCTCGAAGCTGTTCGAATTGAGC ATACCCAGTGCAGCCAGCCCCGAAAAAACTGTGCATTCTCATCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGACAGCGCCAGCGACCGGCTGCTGCTTTCAACTATCGTCGCGCGCCAGGGGCACCGGGTCCTCTGCGCGGGCAATGGTGTGGAAGCGGTGGCCATTTTC ACGGCTGAAAGCCCGCAGTTGATTCTGATGGACGCCATGATGCCGGTCATGGATGGCTTCGAGGCGGCGCGAAGGATCAAGGCGATGACCGGCGAATCGC TGGTGCCGATCATCTTCCTGACCTCGCTCACCGAAGGCGAAGCGCTTGCACGCTGCCTGGACGCCGGTGGCGACGATTTCATGTCCAAGCCTTACAACCC GCTGGTATTGGCCGCCAAGATCAATGCCATGAACCGTCTGCGGGTATTGCACGAAACCGTCCGCCAACAGCGTGACCAGATCGCCAGGCACCATGAGTAC CTGCTCAATGAGCAGCGCGTCGCCAAGGCGGTGTTCGATCAGATCGCCCATGCGGGTTGCCTGGGGGCCAGCAATATCCGCTACCTGCAGTCCCCCTACG
Amino Acid Sequence
>anti-anti-sigma regulatory factor
MTVTSERSADGQTLTLYIEGRFDFNSHQAFRTAYEDYPQSLSYVVDLRGTHYLDSSALGMLLLLRDHAGGDKALVRLVNCTPDVLKILAISNFSKLFELS IPSAASPEKTVHSHR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site