Pseudomonas syringae UB0390, IV03_RS20525
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 25 | 341 | 2.87E-68 |
| PANTHER | PTHR30222 | SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN | - | - | 11 | 341 | 5.2E-44 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 27 | 322 | 4.6E-117 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 128 | 328 | 4.6E-117 |
| CDD | cd13589 | PBP2_polyamine_RpCGA009 | - | - | 25 | 292 | 9.34819E-89 |
| Pfam | PF13416 | Bacterial extracellular solute-binding protein | IPR006059 | Bacterial extracellular solute-binding protein | 47 | 302 | 3.9E-45 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.