Pseudomonas syringae UB0390, IV03_RS21420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig3.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGCGGTATAGAACGCGGGAATGCCCGCGCCACCGGCGCGCAATTTTTCCGCCAGGGTGCCTTGTGGCGTGAGTTCGACTTCCAGCTCGCCGCTGAGCA GCTGTTTTTCGAACAAGGCGTTCTCGCCCACATAGGACGAGATCATTTTCCGGATCTGCCGGTCTTCCAGCAGGATGCCGAGTCCGAAGCCGTCAACGCC GCAGTTGTTGGAAACCACGGTCAGGCCCTTGATGCCCATGCGCTTGATCTGCGCGATCAGGTTTTCCGGGATGCCGCACAGGCCGAAGCCGCCGCAGAGT ACCGTCATGTCGTCGGTCAGCCCGGCGAGGGCTTCTTCGTAGGTCGCTACTCGTTTATCGAGTCCAGCCATGATGATCCGCCTTTTATAGTTGTTGACCG GCAGTCGCACTGCCGGAGGATCGGTTGACCTGCATCTTCTCTCGACGGGACTGATTTGTTAATTTTGTTTTTCTGATCAATTCATAAGAAAAGCAAATAT
DNA Sequence for Gene
>IV03_RS21420
ATGAACGTCAAGCAGCTTCGCGCTTTTCTGGCCGTCGCGCAGTACCTGAGCTTCGCTCAGGCCGGAGAGCGGCTGAACGTTTCGCAACCGGCCTTGAGTC TGACGATTAAAAGCCTAGAAGAGGACCTCGGCGGACAGTTGTTGACGCGCACCACGCGCAATGTGGGTCTGACGCCCGAAGGCGAGACCCTGTTACCGCT GGCGCGCCAGTTGCTGGCCGACTGGGACAACACCGAAGAACTGCTGCGTCAGCGTTTTACCCTGCAAATGGGGAGGGTTTCGGTCGCCGCGATGCCGTCG TTCGCCGGCAATCTGCTGCCAGCGGCCTTGAAGGTATTTCGTGGGCGCTACCCGCGCGTCAATGTGGCGGTGCATGACGTGATCAACGAGCAAGTGCTGG AGATGGTCCGCCATCGCCGTGTCGAACTGGGTATCGGCTTTGAGCCCGAGTCGAACAGTGCCCTTTCGTTTACTCCGTTCTATATGGACCGCTTCGTCGC CGTGGTGCCCCGTGAGTCGCCGCTGGCCGAGCGGCGCGAGGTCGCCTGGGAAGAACTGCTGCGTGAAGACTTCATCGCCCTGCAACGCCCGTCGGCGGTA CGTTTGCTCCTGGAACAGGCCATCGAGCCTCGCCATGGCAAGCTGGCGGTCGCGTTCGAGAGCCATCAGTTGTCGACCATCGGGCGCATGGTTGCCAATG GCCTGGGCGTCAGCGCGGTGCCGTCGCTGTGCATCGGGCAGATGCAGGAACTGGGGGCCTGCTGCATTGCGCTGGTAGAGCCGCTGATCGAGCGGCGTAT CGGGCTGATGATGCTCGCCGATCACAAGCTTTCAGCGGCTGCCCAGGCGTTGTGCGAAGTGTTGATCGAGAATGCTCGCAACAGTCGATAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGACTATCACGGCGGATGATTTTTGCTGCGTCGGGGGCGGGCGTAACCTTGCTTCATTCCTGAAATGAAGCCCGACCGGAGGCCCCCGATGAACCGTATG CTCGCCCTTGCGCTTGTCCTGACATTTACTGTTGCACTGGTTTCCGGCTGCTCCACTCACCACGCTGTCGAGCAGCGGGCATTCAGCGCTGAAGAAAGCC ATCAGTTGGCCCTTGAAGACCTCAACCGTCGCGGTCTGTCGTTTGATGAGTATCAGGCACGCAAGGCGCAATTGATGGCTGATCCACAGATTCAGCAGGC ACGGGACTTCGATGAAAAAGGCGAAACGAGCGTCGACCTGGGTATCACGGGTCAGCAGCCACAAGGCTAACAGTCTGTCTGAACATGGCTTTCCGTAAAA ACTGTACTGCTGTAATTGGCCGTCAACTGTCCGTGTGTTTCCTTGACCGCCTTCGATAGGGTGAGTACCTGACTCACTGATCCGGACAGACAGCATGTTT
Amino Acid Sequence
>LysR family transcriptional regulator
MNVKQLRAFLAVAQYLSFAQAGERLNVSQPALSLTIKSLEEDLGGQLLTRTTRNVGLTPEGETLLPLARQLLADWDNTEELLRQRFTLQMGRVSVAAMPS FAGNLLPAALKVFRGRYPRVNVAVHDVINEQVLEMVRHRRVELGIGFEPESNSALSFTPFYMDRFVAVVPRESPLAERREVAWEELLREDFIALQRPSAV RLLLEQAIEPRHGKLAVAFESHQLSTIGRMVANGLGVSAVPSLCIGQMQELGACCIALVEPLIERRIGLMMLADHKLSAAAQALCEVLIENARNSR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site