Pseudomonas syringae UB0390, IV03_RS21685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig2.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGACCACGCGGCTGCTGTTCGAGTCCAAGCGTGGCGGAACACTTCCGGAATTCAAGCCGTCGGATGTGCTGGGACATATCAACCGCGGCCTTATCAGTT GCAAGCTGGGCAAGCACGTTACGATGGTCGGCGGTGTCATCGACGAAGAGTCAGGTAAACTGACGTACGCAGTGGGCGGACATCTGCCATTGCCTGTGTT GTATTCCGAAGGGCAGGCGCATTATCTGGAAGGTCGTGGGCTGCCGGTAGGGTTGTTCAACGAGGCCACTTACCAGGATCATGAAATTGATCTGCCCGAG TCCTTTAGTCTGACCATGCTGTCTGATGGCATACTGGACTTGTTACCCGGTGATACACTCAAAGAGAAAGAAGCCGTCCTTCCCGAATTAGTCAAGACGG CTGGCGGCAGCCTGGATGGCTTGCAGCGGGTTTTTGAATTGGCAACGCTAGGGGAGATGCCGGATGATATCGCCTTGTTAGTGTTAAGCAGGAATCTTGA
DNA Sequence for Gene
>IV03_RS21685
ATGAGTACCGGTAGAATCCAGTTCGCCGAGCAGGAAGGCACCTTCGTTCTCAAGTTCGTGGGTGAAGTGCGGTTGACGCTGTGTTCGGCCCTGGATGCGA CTATCGAGCGCATCTTCACTGCGCTGAATTTTTCGGCGGTGGTCATTGATCTGACCGAGACACGCAGCATTGACAGCACTACGCTTGGCCTGCTGGCCAA ACTGTCGATTCTGTCGCGCCAGAAGGTGGGCCTGTTGCCGACCCTCGTGACCACTCACGAGGACATCACGCGCCTGTTGCAGTCGATGGGCTTTGATCAG GTCTTCAACATCGTTGACCGGCCTCTGCCGCGGCCTGAGTGCCTGACTGATCTGCCGTCACAGGACCAGTGCGAAGAAGTGGTGAAAGCCAAGGTGCTTG AAGCGCACAAGATCCTCATGGGTCTCAACGACTCGAATCGTGAAGCGTTCCATGATCTTGTCAACGCACTGGAAGGTCAGCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCTGCTCCAAATCGCAGGCAGCAAAAAGGGCGACACCCGTGAGGGTGCCGCCCTTTTTTCGTATCACGCTTTTTTGGCAGGAAGCAGCGCTTCCAGT TTTTCCTGATCGCGAGCGAACTGACGAATGCCTTCGGCCAGTTTCTTGGTGGCCATGGCATCTTCGTTGGAGTTCCAGCGGAACTGGCTCTCGGTCAGGC TCTGACGTGGCTCACCTGCATTATTGCCCGGAGCAAGCTTGCGCTCCAGTGTGCCGGTGTCTTCGGCCAATTGCTTGAGCAGCTCGGTGCTGATGGTCAG GCGATCACAACCGGCCAACTGTTCGATCTGATTCAGGTTGCGGAAGCTGGCACCCATCACGACAGTCTTGAAGTCGTTGGCCTTGTAATAATTGTAGATG CGCGTTACCGACTGCACGCCCGGGTCTTCTGCACCGGTGTAATCGGTGCCTGTCGACTTCTTGTACCAGTCGTAGATGCGGCCCACGAATGGCGAAATCA
Amino Acid Sequence
>anti-anti-sigma factor
MSTGRIQFAEQEGTFVLKFVGEVRLTLCSALDATIERIFTALNFSAVVIDLTETRSIDSTTLGLLAKLSILSRQKVGLLPTLVTTHEDITRLLQSMGFDQ VFNIVDRPLPRPECLTDLPSQDQCEEVVKAKVLEAHKILMGLNDSNREAFHDLVNALEGQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site