Pseudomonas syringae UB0390, IV03_RS23005

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae strain UB0390 contig1.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCTGTCGGTTGCGCAGTACGACAAGACCATCGACCGCGAGTACAAGACGGCCCTACGCGAGCTGGCGACCTACATGATGGAAGATCCACGCTCGATCTC CCGGGTACTGGACGTCATCTGGGTGCTGCGCTCTCTGGAGCGAATCGGCGACCATGCACGCAACATCTCCGAGCTGGTGATCTACCTGGTGCGCGGGACC GACGTGCGGCACATGGGTCTCAAGCGCATGAAGGAAGAAGTGCAGGGTATATCGAGCGAAACCGCTAATGTTCCGGGCAACGCTGACGATAAGTAAGATT GCCTGCGAGAAAAACGCCCAGCACGCGCTGGGCGTTTTTCGTTGTGCAGATCAGTATTTCCCGTCGCCAGCGGACTAAATGTCGCGGCGCAGTCAATCAA TATGGCAGTTGGCTATCAGTCAACGCTATGCTTGCCGAAACAAAGGGCGTGTTGGCATACCGCAGTTCGCCTCCAGGTGAACACGCCCGCAGGAGCGTCG
DNA Sequence for Gene
>IV03_RS23005
ATGAGTAAGGTCAGTGTATTGGTGGTGGATGACGCGACTTTCATTCGCGACTTGGTCAAGAAAGGGCTGCGCAATTATTTTCCCGGGATTCATACCGAGG ATGCAGTCAATGGTCGCAAGGCTCAGACGTTGCTGGGCAAAGAGTCGTTCGATCTGATTCTGTGCGACTGGGAAATGCCCGAAATGTCCGGCCTGGAGCT GTTGACCTGGTGCCGTGAGCAGGACAATTACCTGAGAACCGTTCCGTTCATCATGGTGACCAGCCGTGGTGACAAGGAAAACGTGGTGCAGGCCATTCAG GCCGGAGTAACCGATTTTGTCGGCAAGCCGTTCACCAATGAGCAGCTGCTGACCAAGGTCAAGAAAGCGCTGGCCAAAGTCGGCAAGCTTGACGCCGTCA TGTCCACAGCCCCGGCGCGTATGAACTCGCCGCTCAATGACTCATTGAGTGCATTGACCGGTGGCAAGGCCGAAGTGGTTCGTGCCGCGCCTGCTGCAGC CGCAGCAGCAGCCCCCAAGCCAGCGCCTGCACCCGCCCGATCGGCAGAGCCGACTGGTCGCGGACAGGGCCAGTTGCGCCTGCCCAACGGCATTCAGCCG TGTGTGATCAAGGCCCTTACCCTGAAAGACGCCACACTGGTGATACGCGTCAGCGAAAACCTGCCACAGGTACTCGACAGTGCGGTGCTGGACCTTGAGC AGGGCGAGAGCAACGAAGTGGCGCGCCTGAATGGCTATCTGCACTCAGTCGCCGCGTTCGAGCAGAAGCCCGACAGCGAATGGCTGCAAGTGACCTTCCG CTTTGTCGATCATGACGCGCAGAAGCTCGATTACCTTTCGCGCCTCATTGCTCGTGGCACCGCGCAGAAACACTTCATCCCGGGCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TACCCGCTTCTGAGCTGAATGGCATGCCGCTGCTGCATGAGCCTTGCGCGGTGTCACACGACACTGCGTAACGTGCGTCTGACGTGCCTTCCTTGACGCT TCATTCATGTCCGATTGATACCCTTGCGTCCTCTTCTGCCTGCAAGGCTGCTAGGCTTGGCCCCCAGTGCCCTTGAACCCGAACATCTCCGATGCTTGAA CGCCTGTTTATCCTGTTTGCCCTGACGTTGACTGTGCAGTCGGCCGGGGCTGTCACGATTTATAAATTCACCGATGCCAGTGGCGTGGTGTCCTTTTCGG ACCGGCCGACGCCCGGCGCATCGGTCATGGTGTTTCGGGACCGCATGGTCGAGCGCATCGACGGCCAGGTGCACTTGAGTGTCAGGCGTGAAAGGGGCGT ACACAGCCTGTATGTACGCAACGATCTGTACGCCCCTGTCGAAGTCGAACTCAGGCTTTCCAGTGTGACCAACGTGTTGGGGGTCTCTGGCTCGTCAGCA
Amino Acid Sequence
>chemotaxis protein CheY
MSKVSVLVVDDATFIRDLVKKGLRNYFPGIHTEDAVNGRKAQTLLGKESFDLILCDWEMPEMSGLELLTWCREQDNYLRTVPFIMVTSRGDKENVVQAIQ AGVTDFVGKPFTNEQLLTKVKKALAKVGKLDAVMSTAPARMNSPLNDSLSALTGGKAEVVRAAPAAAAAAAPKPAPAPARSAEPTGRGQGQLRLPNGIQP CVIKALTLKDATLVIRVSENLPQVLDSAVLDLEQGESNEVARLNGYLHSVAAFEQKPDSEWLQVTFRFVDHDAQKLDYLSRLIARGTAQKHFIPGA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site