Strain | Pseudomonas putida S16 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ACGCCCAGGTTGTTGAAGCCCATGCGGTTGATGATGGCCGTTGCCTCCGGCAGGCGGAACAGCCGCGGCTTGGGGTTGCCCGGCTGTGGACGCGGGGTGA CGGTGCCGATTTCGACGAAGCCGAAGCCCAGCTGGGCGAAACCGTCGATGGCCGCGCCGTTCTTGTCCAGGCCGGCCGCCAGGCCCACCGGGTTGGCGAA GTTCAAGCCCATGACCGTAACCGGCAAAGCCGCCGGCTGCTTGCACAGCATGCCGTTGAGACCGAGACGGCCACCGGCACCGATCAGGTCCAGGGACAGG TCGTGGGAGGTTTCCGGGGAAAGCTTGAACAGCAGCTGGCGGGCCAGGGTATACATGGGCAGGCAAGGCTCGGGGTGAATGAGGGGGCGATTATAGCCAG CGTGAGGCCGGCATGACAGCAAATCGTGGGGCTGCTGTCAGATGGCACATCGGTTGCACCGGAAAAGCCCACAGCCTTATCAGTACGGGCGAGGAACCTT
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DNA Sequence for Gene |
>PPS_1658
GTGAACACTGCACCCCGAGCAACGCCCCTGGCCTGGGTCAACGGCAGCGACGCGCCGGAAAAGCCCAGCCTGAACATCGGCTACATGGCCCTGACCGACT GCGCCTCGGTGGTAGTCGCCGCCACCCAGGGCTTCGCCCAGCAGCACGGCCTTACCCTCAACCTCAAGCGCCAAGGCTCCTGGGCCGGGCTGCGCGACAA GCTGGTCAGCGGCGAACTGGATGCGGCGCACTGCCTGTATGGCCTGGTGTACGCCGTGCACCTGGGCATCGGCGGTGTACCGGCCAGCGCCATGGCCGTG CTCATGGGGCTGAACCAGAACGCCCAGGCCATAAACCTGTCCCCGGCCCTGCAGCGCAAAGGCGTGACCAACCCTGAAGCACTGGCGCGCCTGGTGCACC AGCATGGCGCACGCCTCACCTTCGCCCAAACCTTCCCCACCGGCACCCACGCCATGTGGCTGTATTACTGGCTGGCCAGCCAGGGCATCCACCCATTGCG CGACGTCGACAGCGTGGTGGTACCACCGGCGCAAATGGCTGCGCATATCCAGGCCGGGCGCATCGACGGTTTCTGCGTGGGCGAACCCTGGGCTGCCGAT GCAGTGGCCACGGGCCAGGGCTTCACCCTGGCCACCAGCCAGTCGATCTGGCCGGACCACCCGGAAAAGGTCCTGGCCTGCGCCCGCGCCTTTGCCGAGC AATACCCCAACAGCGCCCGCGCGCTGATCAGGGCGGTACTCGCCGCCAGCCGCTTCATCGAGCAAAGCCCGGAAAACCGCCGCAGCACCGCGCAACTGCT CAGCAGCAGCGCCTACCTGGACACTCCGCTGGCAAGTATCGAGCCGCGACTGCTCGGCAGCTACCACGATGGCCTGGGCAACCACTGGCAAGACCCGCAC GCCCTGCGCCTGCACGATCACGGCCGGGCCAACCTGCCGTACCTGTCCGACGGCATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCTTGCTGCGCGATG ACCCCGACTACCTCGGCGTGGCCCGCCAGGTCCAGCAACTGGCACTGTATGGCGAGGCGGCCCAAAGCCTAGGCGTGGCCTGCCCCGAGCAGCCGATGCG CAGCAGCCTGCTGATCGATGGCAGCCGCTGGGACGGCAGCGACCCCTACGGCTATGCCCGCAGCTTCAGCCTGCATGCCCTGGGCGACCTGCCCGATGCC CGTGTCGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGGGACCATTCATGTTGCGCATCCTGCTGATCGACGACACCCAGAGCAAACTCGGCCGCCTCAAGGCGGCCTTGAGCGAGGCCGGCTTCGAGGTCATCG AAGCCCCAGGCCTGACCATCGACCTGCCCGCCTGCGTCGAAACGGTGCGCCCGGACGTGGTGCTTATCGATACCGACTCACCGGACCGCGATGTGATGGA ACAGGTGGTCCTGGTCAGCCGTGACCAGCCACGGCCAATCGTGCTGTTCACCGACGAGCATGATCCCGGGGTGATGCGCCAGGCGATCCAGGCAGGGGTC AGCGCCTACATCGTCGAAGGCATTCATGCCGCGCGGCTGCAACCGATCCTGGACGTGGCCATGGCCCGCTTCGAAAGCGACCAGGCGCTGAAGGCACAGC TGCTTGCGCGCGACCAGCAACTGGCTGAACGCAAGCGCATCGAGCAGGCCAAGGGTTTGCTGATGAAGATGAAGGACTGCAACGAAGAACAGGCCTACAC
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Amino Acid Sequence |
>putative nitrate-binding protein NasS
MNTAPRATPLAWVNGSDAPEKPSLNIGYMALTDCASVVVAATQGFAQQHGLTLNLKRQGSWAGLRDKLVSGELDAAHCLYGLVYAVHLGIGGVPASAMAV LMGLNQNAQAINLSPALQRKGVTNPEALARLVHQHGARLTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQMAAHIQAGRIDGFCVGEPWAAD AVATGQGFTLATSQSIWPDHPEKVLACARAFAEQYPNSARALIRAVLAASRFIEQSPENRRSTAQLLSSSAYLDTPLASIEPRLLGSYHDGLGNHWQDPH ALRLHDHGRANLPYLSDGMWFMTQFRRWGLLRDDPDYLGVARQVQQLALYGEAAQSLGVACPEQPMRSSLLIDGSRWDGSDPYGYARSFSLHALGDLPDA RVGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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