Pseudomonas putida S16, PPS_1166

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1166
Name
Replicon chromosome
Genomic location 1299643 - 1300743 (+ strand)

Cross-References

RefSeq YP_004700621.1
GI 339486093
Entrez 10936824
INSDC AEJ11741.1
NCBI Locus Tag PPS_1166
UniParc UPI0002173167
UniProtKB Acc F8FZX6
UniProtKB ID F8FZX6_PSEP6
UniRef100 UniRef100_A0A099MX65
UniRef50 UniRef50_Q4KHJ5
UniRef90 UniRef90_B1JBT0

Product

Feature Type CDS
Coding Frame 1
Product Name
RND family efflux transporter, MFP subunit
Synonyms
Evidence for Translation
Charge (pH 7) -0.05
Kyte-Doolittle Hydrophobicity Value -0.188
Molecular Weight (kDa) 39.5
Isoelectric Point (pI) 6.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 455 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000154 (998 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1166

Human Homologs

References

No references are associated with this feature.