Pseudomonas putida GB-1, PputGB1_5260
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida GB-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AACTGCACGGCCTGCTGATCGGCCGCAGCTGTGCCGGCGCCGGCTTCGATGCCGATGCCTGGCTGGCCGATGCCGCCCAACTGCTGGAAACCGAGCCGGG TGACACCGTGCGCAACGCCCTGATCGGCCTGCAGGAAATGGTCAAGGGCGAGCTGAACAGCGACGACATGGCCATCGTCCTGCTGCTGCCTTCCGACGAC GCTGCCCTGAGCGACCGCGCCACCGCGCTGGGCCAGTGGTGCCAAGGCTTCATTACCGGTTTCGGCCTGAATGCCGGTGGCAAGGACCTGTCCGACGAGG CCAAGGATGTGCTGCAGGACCTGGTGGCCATTTCCCAGGTACAAGAAGCCCTCGAAGAGTCCGAAGACGGCGAGAGCGACTACATGGAAGTCATGGAGTA CCTGCGCGTGGCACCTCTGTTGCTGTTCTCCGAGCTGGCCAAGCCGGCCGCACCCGCGCCCAAGCCATCGCTGCACTGATCAACCGGGGGAAGTCTGCCC
|
|
| DNA Sequence for Gene |
>PputGB1_5260
ATGAGCCACATACCCAAGGCCGAGTATGCCCGTCGGCGCAAGGCGCTGATGGCGCAGATGGTCCCCAACAGCATCGCCATTCTGCCCGCCGCTGCGGTTG CCATCCGCAACCGTGATGTCGAGCACGTGTACCGCCAGGACAGCGACTTCCAGTACCTCAGCGGCTTCCCGGAGCCCGAAGCGGTGATTGCGCTGATACC GGGGCGCGAGCATGGCGAATATGTACTGTTCTGCCGTGAACGCAACCCCGAGCGCGAGCTGTGGGACGGCCTGCGGGCCGGCCAGGAAGGCGCGGTGGGC GATTTCGGCGCCGACGATGCCTTCCCCATTACCGACATCGATGAGATCTTGCCGGGCCTGATCGAAGGCCGTGAGCGGGTCTACAGCGCCATGGGCAGCA ACCCCGAATTCGACCGCCGGCTGATGGACTGGATCAACGTGATCCGCTCCAAGGCACGCCTGGGCGCCCAGCCACCGAACGAGTTCGTTGCGCTGGATCA TCTGCTGCACGACATGCGCCTGTATAAATCGGCGGCGGAAGTGAAGGTGATGCGCGCGGCCGCAGACATTTCGGCGCGGGCCCATGTGCGGGCCATGCAG GCCTGCCGGGCCGGGCTGCACGAATACAGCCTGGAAGCCGAGCTGGACTACGAATTCCGCAAGGGCGGGGCGAAGATGCCGGCCTACGGCTCAATCGTCG CGGCCGGGCGCAATGGCTGCATCCTGCACTATCAGCAGAACGACGCGCCGCTCAAGGATGGCGACCTGGTATTGATTGACGCTGGCTGCGAAATCGACTG CTACGCCAGTGACATCACTCGCACCTTCCCGGTCAGCGGGCGTTTTTCGCCCGAACAGAAGGCCATCTACGAGCTGGTGCTCAAGGCCCAGGCGGCGGCG TTCGCCGAAATCGCCCCCGGCAAGCACTGGAACCACGCCCATGAGGCGACCGTACGGGTGATCACCGCTGGCCTGGTGGAGCTGGGCTTGCTGGAAGGGG ATGTGCAGGCGCTGATCGACAGCGAGGCCTATCGCGCCTTCTACATGCACCGCGCCGGGCACTGGTTGGGCATGGATGTGCACGACGTGGGCGACTACAA GGTGGGCGGCGAATGGCGGGTGCTGGAACCCGGCATGGCGCTGACCGTGGAGCCGGGGATCTACATTGGCGCCGACAATCAGGCCGTGGCCAAGAAGTGG CGCGGCATTGGGGTAAGGATCGAGGACGACGTGGTGGTGACCAGGCAAGGTTGTGAAATCCTGACTTCGGGCGTGCCGCGCACGGTTGCCGAGATCGAGG CGCTGATGCAGGCCGCCCGCAAGGACGCGGCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACCGGGTAAACCTGGCGATCATCGGTGGTGGCCTGGTGGGTGCAAGCCTGGCCTTGGCGCTGCAGGCAGGGGCCAAGGCGCGTGGCTGGAAGATCCTGCT GATCGAGCCGTTCGCCCCCGGCGACAGCTTTCAGCCCAGCTACGATGCGCGCTCGTCGGCGTTGTCATTCGGCACCCAGCAGATCTATCAACAACTTGGC CTGTGGCAAGCCATCGGCCGCCGCGCCGAGCCGATCCGGCAGATTCACGTATCCGACCGTGGCCGCTTTGGCGCCACCCGCCTGGATGCCCTGGAAGAGG GAGTCCCGGCGCTGGGTTACGTGGTGGAGAACGCCTGGCTCGGGCAGTGCCTGTGGCAAGGGCTGGACAGCGAGGTGGTGAGCTGGCGCTGCCCGGCGGA AGTGACCGCGATGCAGGCCATCGAAGGCGGTTACCGCCTGCGGCTCAACGATGACACCCAACTGGAATGCGACCTGGCGGTACTGGCCGACGGTGGCCGC
|
|
| Amino Acid Sequence |
>peptidase M24
MSHIPKAEYARRRKALMAQMVPNSIAILPAAAVAIRNRDVEHVYRQDSDFQYLSGFPEPEAVIALIPGREHGEYVLFCRERNPERELWDGLRAGQEGAVG DFGADDAFPITDIDEILPGLIEGRERVYSAMGSNPEFDRRLMDWINVIRSKARLGAQPPNEFVALDHLLHDMRLYKSAAEVKVMRAAADISARAHVRAMQ ACRAGLHEYSLEAELDYEFRKGGAKMPAYGSIVAAGRNGCILHYQQNDAPLKDGDLVLIDAGCEIDCYASDITRTFPVSGRFSPEQKAIYELVLKAQAAA FAEIAPGKHWNHAHEATVRVITAGLVELGLLEGDVQALIDSEAYRAFYMHRAGHWLGMDVHDVGDYKVGGEWRVLEPGMALTVEPGIYIGADNQAVAKKW RGIGVRIEDDVVVTRQGCEILTSGVPRTVAEIEALMQAARKDAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|