Pseudomonas putida GB-1, PputGB1_4957 (motB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida GB-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AACGCATGACTGCGTTCGTCTGCGACTACCTGCGCATCATGTCTACCGGCAACATGGCCCCGCACGAGCTCGAGGGCCTGTTCGACATGGAACTGCTGAG CATGAAAGAAGAGCTGGAGCACCCGTCGCACGCGGTGACCGGCATCGCCGACGGCATGCCGGGCTTCGGCATCGTCGCGGCGGTACTGGGTATCGTGGTG ACCATGGCCTCGCTGGGCGAAGGTGACCAGGCGGCCATCGGCATGCACGTGGGTGCGGCGCTGGTCGGTACCTTCTTCGGTATTCTGGCGGCCTACGGCT TCTTCGGCCCGTTGGCCAAGTGCCTGGAGCACGACGCCAAGGAAGAGCTGAACCTGTACGAATCGATCAAGGCTTCGCTGGTGGCCTCTGCCTCGGGCAT GCCGCCTTCGTTGGCGGTCGAGTTCGGGCGCAAGGTGCTGTACCCCAAGCACCGCCCAAGCTTCGCCGAACTGGAACAAGCGGTTCGCGGTCGCTGAGTC
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| DNA Sequence for Gene |
>PputGB1_4957
|motB
ATGGAAAACAACCAGCCCATTATCGTCAAGCGCGTCAAGCGCTTTGGCGGCGGCCACCACGGCGGCGCCTGGAAAATCGCCTTCGCCGACTTCGCCACGG CGATGATGGCGTTCTTCCTGGTGCTGTGGCTGATGTCCACGGCCACGCCAGAACAGAAGATCGCTATTGCCGGCTACTTCAAAGACCCGATCGGCTTTTC GGAAAGCGGCACGCCCTACGTCATCGACCTGGGCGGCTCGCCTGAGCTGGCACCGGAAAAGACCATCAACCCGGAAGTGAAGGCCGAACCGACGCAAGAG TCCACCACCCAACTGAGCAAGGACCAGGTCGAGACCATGGCCGAGCAGGTGGAGCGTGAGCGCCTGGAACTGCTGCTGCAAGAACTGCAGAACAAGGTGG AAGAGAACCCGCAGTTGCAGAAGTTCAAGGACCAGATTCTGTTCGAGATCACCCAGGACGGCCTGCGTATCCAGATCATGGACGCCGAGAACCGGCCAAT GTTCGACATTGGCAGTGCGCGCCTGCAGCCGTACTTCGAAGACATCCTGCTGGCCATGGCCGACACCATCAAGGCGGTGCCGAACAAGATCAGCATCAGC GGCCACACCGATGCCAAGCCGTATGCCGGCACCGGCGAGTTCGGTAACTGGGAGCTGTCGGCCAACCGCGCCAACGCCGCACGTCGTGCGCTGGTGGCCG GTGGTTACCCGGACGGCCAGGTGGCGCGGGTGGTGGGCTACGCCTCGTCGTCGCTGTTCGACCGCAAGGACCCGTTCAACCCGGTCAACCGCCGCATCGA CATCATCGTGCTGACCAAGAAGGCCCAGCGCAACATCGAGGGTGAGCAGGGAGCGCCGGAGGCACCGGCCGCCCCGCCTGCCGCACCGCCAGCCAATGAC GCTGCGCCAGGGGCTTCGGCACCGGCCGCGCCAGCTGCATCGGGGACGGGTGGCGAGGCCGAACAGGCACCGATGCAGCCGCGCGAACTGCGCCAGAAAC TGAACATCTTCGAGGATGGTACGTTGAAGATGGATGAGGCCAAGGACCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCGGCATTTCGCGGGCACAACTGTCTTGCTCAACATCCAGGGGGTTCGCGATCACCGGCGTAGCCGGTGTTTGCGGCTGCATCTCCGTCAGAACCCCC GCCTGATCTTGGCCTTGAGATCAGCATGAAAGAAGGCTGCATTATCCCTGTCAGTGCAAGAGCCGCGCCCCGGCGGCAGTGTCATGGCTCGCTCGAACAT GCGTTCGTCATGATAAGCCCGCACGAACAGGTCGATATGCGTACGTTCGCGCATGGCCGGCCATTTGCTCAGGCAAACCGGCAGTGCGCCTGAACCTTTG CGGAAGAAACTCACTCGCCGGCAGGTAATCGCTGCCGCCCCCAGCAGCCAGGCGGTCCACCAGGCGTCGTTGGTATCGGTCGGCAATACTCCGATCCAGT GGGTGGCATCGTTCATCTGCTGGCAGAAACTGCCATACAGGTCGTCATGGGTTTGCCCGTCGCAGTCCAACTGCACCACTTGGGTGGGGATGCCTTCGAG
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| Amino Acid Sequence |
>flagellar motor protein MotB
MENNQPIIVKRVKRFGGGHHGGAWKIAFADFATAMMAFFLVLWLMSTATPEQKIAIAGYFKDPIGFSESGTPYVIDLGGSPELAPEKTINPEVKAEPTQE STTQLSKDQVETMAEQVERERLELLLQELQNKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPNKISIS GHTDAKPYAGTGEFGNWELSANRANAARRALVAGGYPDGQVARVVGYASSSLFDRKDPFNPVNRRIDIIVLTKKAQRNIEGEQGAPEAPAAPPAAPPAND AAPGASAPAAPAASGTGGEAEQAPMQPRELRQKLNIFEDGTLKMDEAKDQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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