Pseudomonas sp. MOIL14HWK12:I1, PSEK12I1_RS0101140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. MOIL14HWK12:I1 PseK12I1DRAFT_scaffold_1.2_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCGGACAACCACAGCGCTGGGTAGATTTTCATCCTGAACTCCAGGGGTCGCGAGGGGAAGGGCCGCTGGCCGCTGCACGTACCGGTCCGTCTGGCCCG GGGGCTGGTGGCTTTTCGCCATAAGTGGCCAGAAGGGCGACGGACGGTCGCCGGGCCTGACCTACAACCGTGCCCGTTGAGTCGCCATGCCACATTTTGG CGCGCGTCGGTTACGTCTCGGTGTTACCGATGGCGTCCACCTGGCGAAGTGCCATCGGCAAAGGGTCGGTCTCGGATCAGAAAGGTCGCAAATAAAAACC CTAGCTAATCAACGTCATTGAGCGCTGCTGAATGGGTTGTTCGTGCCAGACAGCTTGCCTGGGCAGGGGTTCACCCAGTTTCGGCATGGGAATTGCGACA TGACTTATGCGTCCGCGACACATCTTTCACCCAACGTTGTCCGTCGCACCTCATTAGAGCCCAGCCAAGGGCCCCAGCCTGCGTGAAGGAGATTCAAACC
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| DNA Sequence for Gene |
>PSEK12I1_RS0101140
ATGTCGCCCATTCCCACCTCGTCACAGGCCCGTGCGATCCAGTCCATCGGCTTTCTGCTGCTGGACAACTTCACACTCATCTCCCTGGCGTCGGTGGTGG AGCCGCTGCGCATGGCCAATCAGCTGTCGGGACGGGAACTCTATCGCTGGTGCACCCTGAGCCTGGACGGCCGACCGGTGCGGGCGAGCGATGGCCTGCA GATCACCCCGGACAGCGCCGTGAGCGCCGCCCCGGTGATGGACATGGTGATCGTCTGCGGCGGCGTGGGCATCCAGCGCAGCGTGTCGCGCGAACATTGC ACCTGGCTGCAGAGCCAGGCGCGCCAGGGCCGCAAGCTGGGCGCGGTCTGTACCGGCAGCTGGGCCCTGGCCCGGGCCGGCCTGCTCGACGGCTACGACT GCAGCGTGCACTGGGAAACCCTGGCGGCCCTGCAGGAAGCCTATCCGCGCGTGGTGCTCAGCACCCGCCTGTTCACCATCGACCGCAATCGCTGCACCGC CTCGGGCGGCACCGCGCCGATGGACATGATGCTGCACCTGATCGGTCGCGAGCATGGCCGCGAGCTGTCGGCGGCGATCTCGGAAATGTTCATCTACGAG CGCATCCGCAACGAGCAGGATCACCAGCGCGTCCCTCTCAAGCACATGCTGGGCACCAACCAGCCCAAGCTGCAGGAAATCGTGGCGCTGATGGAAGCCA ACCTCGAAGAACCCATCGACCTCGACGAACTGGCGGTCTACGTGGACGTGTCCCGACGCCAGCTGGAGCGGCTGTTCCAGAAGTACCTGCACTGCTCGCC GTCGCGCTACTACCTCAAGCTGCGGCTGATCCGCGCCCGGCAGCTGCTCAAGCAGACCACCCTGTCGATCATCGAGGTGGCCTCGGTGTGCGGCTTCGTC TCCACTCCGCACTTTTCCAAGTGCTACCGCGAATACTTCGGCATCCCGCCGCGTGACGAGCGCCAGGGGCCGACCATCCAGCAGCCCATCGCGCTGATGC CGCTGTCCCAGGAATTGTCGCTGATGCCGGCCTCGTCCGCGCTGGCGGCCCTGAGCCAGGCCCAGGGCGAATCCACCTTTGCCAGCGTGCGGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCCTGCGGCCGCCTAGCGACCGCTGGGCAGGCTGAGCAGCACCGCCGCCGTCTGCAGATCCGGCTGGCCGTCGAAGCGGCCCGGCCGGTACTTCATC TGGAAGGCGCCGATCACATCGCGGGTGGCCGCATCGAGCACGCCGGTGCGGGGCACCGCATAACCGATCCGTGCCAGCTGATCCTGAAACCAGGCCGGGG GTGGCAGCACGCCCCCCAGGCTGGCTTGACGCTGGGCGACCACCGCCGGATCCGGCCAGTTGATCAGGCCCGCGGCGGCCAGACGCGCCCAGGGAAACAG CGGACCCGGATCCTGCTTGCGCCCCGGGGCGATATCGCTGTGGCCAACGATGGCGCGGCGATCCAGGCCATGGCGTTGTTCGATGTCCTTGAGCAGCGGA ATCAGCGCCTTGATCTGGGCTTCGCTGAAGGGATACCACTGGCGTCCGGCCGGGGTGTCGCGAAAGCCCAGGTTGACCATCTCGATGCCGATGGAGGTGG
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| Amino Acid Sequence |
>AraC family transcriptional regulator
MSPIPTSSQARAIQSIGFLLLDNFTLISLASVVEPLRMANQLSGRELYRWCTLSLDGRPVRASDGLQITPDSAVSAAPVMDMVIVCGGVGIQRSVSREHC TWLQSQARQGRKLGAVCTGSWALARAGLLDGYDCSVHWETLAALQEAYPRVVLSTRLFTIDRNRCTASGGTAPMDMMLHLIGREHGRELSAAISEMFIYE RIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVYVDVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTTLSIIEVASVCGFV STPHFSKCYREYFGIPPRDERQGPTIQQPIALMPLSQELSLMPASSALAALSQAQGESTFASVRL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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