Pseudomonas oleovorans MOIL14HWK12, PSOK12_RS0110450

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00817
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003684 damaged DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF100879
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003887 DNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03586 PolY_Pol_IV_kappa IPR022880 DNA polymerase IV 19 348 0.0
Gene3D G3DSA:1.10.150.20 - - - 189 243 1.8E-17
Gene3D G3DSA:3.30.1490.100 - IPR036775 DNA polymerase, Y-family, little finger domain superfamily 255 362 6.6E-23
PANTHER PTHR11076 DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER - - 14 356 1.4E-101
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 18 179 2.8E-66
Pfam PF11799 impB/mucB/samB family C-terminal domain IPR017961 DNA polymerase, Y-family, little finger domain 254 349 1.1E-7
Hamap MF_01113 DNA polymerase IV [dinB]. IPR022880 DNA polymerase IV 15 362 37.321991
Pfam PF00817 impB/mucB/samB family IPR001126 UmuC domain 21 168 1.1E-51
FunFam G3DSA:3.30.70.270:FF:000002 DNA polymerase IV - - 82 179 2.6E-40
SUPERFAMILY SSF100879 Lesion bypass DNA polymerase (Y-family), little finger domain IPR036775 DNA polymerase, Y-family, little finger domain superfamily 256 362 8.24E-21
FunFam G3DSA:3.40.1170.60:FF:000001 DNA polymerase IV - - 35 87 7.9E-27
Coils Coil Coil - - 274 294 -
FunFam G3DSA:1.10.150.20:FF:000019 DNA polymerase IV - - 181 242 3.0E-22
SUPERFAMILY SSF56672 DNA/RNA polymerases IPR043502 DNA/RNA polymerase superfamily 12 248 1.69E-95
Pfam PF11798 IMS family HHH motif IPR024728 DNA polymerase type-Y, HhH motif 182 211 3.3E-6
Gene3D G3DSA:3.40.1170.60 - - - 35 87 2.8E-66

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.