Pseudomonas brassicacearum 51MFCVI2.1, PSBVI21_RS0128785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas brassicacearum 51MFCVI2.1 PsbVI21DRAFT_scaffold_4.5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCTGGTCAGCCCGCTGTGGCGCTTCATGGTCGCACCGGGTGTGTGTGGCCCGGACGCCGCGGTCGGCGTGGTGATGCCGAGCATTGACCGGGTCGGCCG TTATTTCCCGCTGACTGTCGCGATGCTGCTGGAGCCCGACGCGGACCCGGCGTCGGTGGTGGGCGGTGCGGACGAGTGGTTTGAGCGGGTCGAGAACCTG TTGCTGAGCACGTTGAGTGTCGAGGCCAGTTTCGAGGCGTTCAACGAACAGCTGGAGACCCTGGGCAGCCCGATGTACCTGCCGCGCACGCCGAGCAGCC GCTTTGCCAGCCTGCATCGCTTCGATGCCACTGACCCGCAACGGCGCATGAGCGCCCTCGCCGAGGCAGCCTGCGAAGGCGCGAGCCTGTGGTGGGGCCA GGGATCGGAGCGCATTGCCCCGGGGTTGATGCGCTGCCAGGGACTGCCGGCGGCGGCTGATTTTGCGCAATTTTTGCTCGGCCAAGAAGGTGTTGTGTAG
|
|
| DNA Sequence for Gene |
>PSBVI21_RS0128785
ATGCGTCCAAGTGCCGGAAAAGCAATCAAGTCTGCAAGCAAGAGCCATGTCGGGATGGTCCGCCAGGTCAACGAAGACGCCTGCCTGGACCTGCCGGAAA ACGGCCTCTGGGTCGTGGCCGACGGCATGGGCGGGCACGCGGCGGGCGACTACGTCAGCAGCCTGATCGTCGACAGCCTGCGCGGCATTGCCGTGGGTCG TTCGCTGGACGAATACGTCGCGGCGCTGCAAAGCGACCTGTTGCGGGTCAACGCCGCCGTGCGTGAAGAAACCGCCAACCGTGGCGTGACGATGATGGGC AGCACTGTGGTGGTGTTGGCCGCCCGCGACCTGCGCGGCATGTGCCTGTGGGCCGGTGACAGCCGTTTGTATCGCCTGCGCGACGGCGTGCTCGAAGGCA TCTCCCGCGACCATAGCTACGTCCAGGATCTGCAGGACAGCGGCCTGCTCAGCGAAGCCGAGGCGCGGGTGCATCCACGCGCCAACATTGTCACCCGGGC GATTGGCGTCGAGGCGCAACTGAACCTGGCGCTGACCGAGCTGCTGCTGGTGCCCGGCGACAGTTACCTGTTGTGCAGCGACGGGCTGACCAAGACCGTC GAGGACGATGAAATCCGCGAGGTATTGAGCCACGACGAGCCCGGCGAAATCGCCAGCAGCCTGGTGTCCCTGGGCCTGATGCGCGGCGCGCCGGACAACA TCACCGTGGTGGTTGTGAAGGTGCCGTCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCTTGACCTTGAACATTGTCATCCCCGGTTACGACATCGAAGGGCCGATCGGCGAAGGCGCGATGGCCAGCGTGTACCTGGCGACCCAGCGTTCGCTGGA ACGCAAGGTGGCGTTGAAAGTCATGGCCGCCGCACTGGCGGCCGACCCGACCTTCTGCGAGCGTTTTTTGCGCGAAGGCAAGACGCTGGCGCGCCTGTCG CACCCGCACACCGTCACCATCCATGACATCGGCAACGTCGGTGAGCTGTATTACATGGCGATGGAGTACCTGCCCAACGGCACGCTCAAGGAACGCATCG CCGCGGGCCTGACGCCGGAGCAGGGCCTGACCTACATCCGCCAGATCGCCTCGGCCCTGGGTTATGCCCACGGGCTGGGCCTGGTCCACCGTGACGTCAA GCCGGCCAACATCCTGTTCCGCGCCGATGGCACGGCGGTGCTCTCGGACTTCGGCATCGCCAAGTCCCTGGACGACCGCACCCAGTTCACCCAGGCCGGC
|
|
| Amino Acid Sequence |
>serine/threonine phosphoprotein phosphatase PppA
MRPSAGKAIKSASKSHVGMVRQVNEDACLDLPENGLWVVADGMGGHAAGDYVSSLIVDSLRGIAVGRSLDEYVAALQSDLLRVNAAVREETANRGVTMMG STVVVLAARDLRGMCLWAGDSRLYRLRDGVLEGISRDHSYVQDLQDSGLLSEAEARVHPRANIVTRAIGVEAQLNLALTELLLVPGDSYLLCSDGLTKTV EDDEIREVLSHDEPGEIASSLVSLGLMRGAPDNITVVVVKVPS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|