Pseudomonas thermotolerans J53, M905_RS0103710
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas thermotolerans J53 PsesuJ47DRAFT_scaffold_4.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGTGGGCCAGGCCGTGGAAGGTGCCCACCCACATGCCTTGCGGGTTGTCGCCGAGCAGCTGTTCGATGCGCTGGCGCATCTCGTTGGCGGCCTTGTTG GTGAAGGTCACCGCCATGATGCTGTGCGGCGAGGCGCCCAGGCACTGGATCAGGAAGGCGATGCGGTGCACCAGTACGCGGGTCTTGCCCGAGCCGGCGC CGGCCAGCACCAGGTGGCGGCCCAGCGGGGCGGCCACCGCGCGGCATTGCGCATCGTTGAGGGAGGCGAGGAGGAGTTCGGGATCGTTGAGCATCGCGGC ATTGTAGGGGCAGCGGGGGGCGGTCGCCAGCCGCAGCGCGTCGGTGGCGGCGATCTGTGCGGAAAACCGTCGAACACGCGCGGAACCCTCTACCAAAGGT AGGTGTAATGGTAATTTGCCAGGCCGAGTATTGGGCTTGCGGAAAAGGCCGAGTATGCTTCGGCCTTCCTCTAGGCCGAACCATTACAAGAACAGCGCCT
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| DNA Sequence for Gene |
>M905_RS0103710
ATGATCGTTACTTCGAGGCCCAGCCGTAACGGGCCGTCTGTGGACGCCGTTGGCGATGTTCGCCAGCAGTTCGCCGCGGAAATCGCAGTGGAGCGCATTC GCCTGCTCTATCATGGCTCGCGGACGCCTACCCTGTTCATGCTGCTCTGTGGCCTGGTCTGCGCAGTCCTGCTCTGGGACCAGGGCCACGTCCCCGGCCT CAGCCTCTGGCTGCTGGGTCTGGTGTTCCTCGCCGTGCTGCGTCTCACCCAGGTGGCTGCCTTCAGCCGCGCCGCGCCGGCACGCCAGGCCCATCCGCGC TGGCACCGGCTGTTCATGCTCGGCGCCGCGGTTTCCGGCTGCGTGCTGGCCGTGGGCGCGGTCACCCTGGTGCCCGCCGACCTGTTCTTCCTCCAGGCCA TGGTATTCGGCCTGGTGGCCGCCGCCATCATCTCCGCCAGCGTCGCCTATGCGGTCAGTCTGCCGGCCTTCCTGAGCTTCGCGCTGCCCTGCCTGGGACC GGCCATGGGCTATCTGCTGCTTTCTCCGCATCCCCTGCTGCAGGGCTGGGGACTGCTAGCCGGCATTCTCTTGGCCGGGCTGATGGTGGTTGCCTGGCAG GTCAACCGCCTGGTGTTGCGCAACCTGCTGCGGCGTTTCCAGAACCTGGCGCTGATCCAGCACCTGGAGGAAGCCAAGGCCCGCGCCGAGGGCCTCAACC ACCAACTGGCCCGCGAGGTGGAGCAGCGCCGCCGCGCCGAGCGCGAGCTGCGCGCTGCCCGCGACGAGCTGGAGGAACGCGTCGAGCTGCGCACCCGCGA GCTGGCTCAGGCCGGGCATGCCCTGAGCGAGAGCGAGGAGCGCCTGGCCCTGGCCCTGGAGGCCAGTGGCCTGGGCCTCTGGGACTGGAACCTGGAGACG GACGAGGTGCACCACTCGCGGCTCAAGGAGATCTTCGGCATCGAGCCGGCGGCGGTCACCGGGGTGATCCGCCACCTCAGGCCGCGCCTGCATCCGGACG ACCTGCCGGCGCTGCGCCGGGCCTTGGTCGAGCACTTGAAGGGGCTCAGCGACGGCTACTGCATCGAGTACCGGGTGCGTCACGCCGACGGCCACTGGAT GTGGATCGAGGACCGCGGCCGCGCGGTGGAGCGCGACGCCTCCGGCAAGGTGCTGCGGATGATCGGCACGCGCCGCGACATCAGCCAGTGGAAGAGCCGC GAGGAGGAGCAGCGCCTTTCGGCGATGGTCTTCGAGGCGGCCAGCGAGGGCATCGTCATCCTCGACGCCGACTACCGGGTGCTGATGGTCAACCGCGCCT ACAGCGAGGTTACCGGCTACCGCCTGGAGGACGTTCAGGGGCGCCGCCTGGCCGAGCTGGGCGACAACCGCGATTTGCACCGCCAGTACCAGGCGATCTA CGCCGAGCTGGAGCGCCACGGCCACTGGCAGGGCGAGCTGATGGACACCCGCAAGAACGGCGAGCTGTATCCGCAGTGGCTGCAGCTCAACGTGGTGCGT GACAGGCAGGGCCGGGTCAGCCACGTGGTGGCCTTCTTCGCCGACCTCACCGCGCGCCGCGAGGCGGAGGAGCGCCTGCGCTACCTGACCCACTACGACG AGCTGACCGGCCTGGCCAACCGCGTGCTGTTCATGGAGCGCCTCCACGAGGCCGGCCAGCGCGCCCGCCACGAGGGCCGCCGGGTGGCCCTGCTGCACCT CGACCTGGACCGCTTCAAGCTGCTCAACGACAGCCTCGGCCACGAGGTCGCCGACCAGCTGCTGCGCCAGATGAGCCACCGCCTACTGCAGGCGGTGCCC GAGGCGGACACGGTGGCGCGGCTGTCCGGCGACGAGTTCGCGGTGATCCTCGACGCCTACACCAGTCTCTCAGCCCTGGCGCGCATCGCCGGACGGCTGC TCGCCAAGCTGCGCGTGCCCATGACCATCGGTGACCACGAGCTGGTGGTCAGCGCCTCCATGGGCATCAGCCTGATGCCGGAGAACGCCCGGGAGATCTC CACCCTGGTTAGCCAGGCCGGCATGGCCATGCGCCACGCCAAGCATCTCGGCGGCAACATCTTCCAGTTCTTCACCGACAACCTGCACGCCCGCACCGTG GAGCGTCTGCAGCTGGAGAATCAGCTGCGCAAGAGCATCGAGCAGGGCCAGCTGGAGGTGTTCTACCAGCCCAAGCTGTGCCTGGCCGACGATAGCATCA ACTCCGCCGAGGCGCTGGTCCGCTGGCGCTGTCCGGAACAGGGCCTGGTGTCGCCCGGCGAGTTCATCGCCCTGGCCGAGGAGACCGGGCTGATCGGCCC GATCGGCGAGTTCGTGCTGCGCACCGCCTGCCGCCAGGCCCGTGAATGGCAGCGCCAGGGGCTCGCCGACCTGCGCGTGTCGGTGAACATCTCGGTGCAC CAACTGCGACAGGGCAATCTGGTGCGGCTGATCCACGAGGTGCTGGAGGAGACGGGCCTGCCGCCGCGCCTGCTGGAGCTGGAGCTCACCGAGAGCCAAC TGCTCGACAACGTGGAGAGCGTGATCTCCATCTTCCGTCAGCTGCGCGAGCTGGGCGTCAAGCTGGCGATCGACGACTTCGGCACCGGCTATTCCTCGCT CAGCTACCTGAAGCGCTTCCCAGTGGACTACGTGAAGATCGACCAGACCTTCGTCCGCGACCTGTCCCACGGCGGCGAGGACGCGGCCATCACCCGGGCG ATCATCGCCATGGCCCACAGCCTCGGCCTCAAGGTGGTCGCCGAGGGGGTGGAGACCCAGGAGCAGATGGACTTCCTCAAGCTGCAGCGCTGCGACGAGA TCCAGGGCTACCTGATCAGCCGCCCGGTGGAGACCCCGGCGTTCGCCAGCCTGCTGCGCGAGCAGGCGGCGCTCTGTTCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGCCGGCACGCCAGCGTTACCGCAGGTAGCCGCCGGTCCCACTCAAGGATGGCTGCCGCGTCGCGCAGCGCCCGTCATGCTGGGACCTGGACTCCCCCA GAGAAGGACCGCTGCCATGGACAAACTCAAGCTCGGCCAGCGCCTGCTGCTGGCCGCTCAGGGTGTCGCCCCGCTGGCCCTCAAGCTGCCGGTGATCCTC CGGCTCGGGCCGCAGCGCGTCGCCGAGCTGGCCCCGCACCTGCCGGGCGCCAGGCTGCGCGAACTGATCCTCGCCCTGCCGGTCGACTTCCTGGCCAAGA CCGCGGTGCACCTGGACCCGCGGGCGATCCTCGACACCTATCTGAGCCTGCCGGACAGCCTGCACCTGGAAGTCGCCCGCCAGCTCTGCGCTGACCGCCA GTTCGCTACCGCGGCGCGCTACGCCGAGTGCCTGTCGCCGTTGAAGATCCGTGTGCTGATCATCGGCATCAACAATGTCGACCACGTGATGCAGATCGCC
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| Amino Acid Sequence |
>diguanylate cyclase
MIVTSRPSRNGPSVDAVGDVRQQFAAEIAVERIRLLYHGSRTPTLFMLLCGLVCAVLLWDQGHVPGLSLWLLGLVFLAVLRLTQVAAFSRAAPARQAHPR WHRLFMLGAAVSGCVLAVGAVTLVPADLFFLQAMVFGLVAAAIISASVAYAVSLPAFLSFALPCLGPAMGYLLLSPHPLLQGWGLLAGILLAGLMVVAWQ VNRLVLRNLLRRFQNLALIQHLEEAKARAEGLNHQLAREVEQRRRAERELRAARDELEERVELRTRELAQAGHALSESEERLALALEASGLGLWDWNLET DEVHHSRLKEIFGIEPAAVTGVIRHLRPRLHPDDLPALRRALVEHLKGLSDGYCIEYRVRHADGHWMWIEDRGRAVERDASGKVLRMIGTRRDISQWKSR EEEQRLSAMVFEAASEGIVILDADYRVLMVNRAYSEVTGYRLEDVQGRRLAELGDNRDLHRQYQAIYAELERHGHWQGELMDTRKNGELYPQWLQLNVVR DRQGRVSHVVAFFADLTARREAEERLRYLTHYDELTGLANRVLFMERLHEAGQRARHEGRRVALLHLDLDRFKLLNDSLGHEVADQLLRQMSHRLLQAVP EADTVARLSGDEFAVILDAYTSLSALARIAGRLLAKLRVPMTIGDHELVVSASMGISLMPENAREISTLVSQAGMAMRHAKHLGGNIFQFFTDNLHARTV ERLQLENQLRKSIEQGQLEVFYQPKLCLADDSINSAEALVRWRCPEQGLVSPGEFIALAEETGLIGPIGEFVLRTACRQAREWQRQGLADLRVSVNISVH QLRQGNLVRLIHEVLEETGLPPRLLELELTESQLLDNVESVISIFRQLRELGVKLAIDDFGTGYSSLSYLKRFPVDYVKIDQTFVRDLSHGGEDAAITRA IIAMAHSLGLKVVAEGVETQEQMDFLKLQRCDEIQGYLISRPVETPAFASLLREQAALCS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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