Pseudomonas thermotolerans J53, M905_RS0110030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0005515 | protein binding |
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.58.2200 | - | IPR038440 | FimV, C-terminal domain superfamily | 863 | 922 | 2.9E-26 |
| NCBIfam | TIGR03504 | JCVI: FimV/HubP C-terminal domain | IPR020011 | Motility protein FimV, C-terminal | 879 | 922 | 1.3E-19 |
| CDD | cd00118 | LysM | IPR018392 | LysM domain | 184 | 236 | 0.00146427 |
| Coils | Coil | Coil | - | - | 321 | 369 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | IPR011990 | Tetratricopeptide-like helical domain superfamily | 563 | 639 | 1.8E-6 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 396 | 413 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 511 | 538 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 375 | 469 | - |
| Coils | Coil | Coil | - | - | 621 | 641 | - |
| NCBIfam | TIGR03505 | JCVI: FimV/HubP N-terminal domain | IPR020012 | Motility protein FimV, N-terminal | 190 | 261 | 2.8E-28 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | IPR036779 | LysM domain superfamily | 181 | 237 | 7.8E-6 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.