Pseudomonas sp. URMO17WK12:I11, H041_RS0105315
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I11 H041DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGAACGCCGCGATCCAGGCCTCGCTGGCGGGTGAGGCAGGGCGGGGGTTCGCCGTGGTCGCGGACGAGGTCCAGCGCCTGGCCGAGCGCTCGTCCTCTGC CACGCGGCAGATCGAAGCCCTGGTGCGGACCATTCAGGCCGACACCAACGAAGCGGTCATTTCCATGGAACAGACCACGGCCGAAGTCGTGCGCGGCGCC AGGCTGGCGCAGGACGCCGGCGTGGCGCTGGCTGAGATCGAAGGGGTTTCGCAGAACCTTGCCGACCTTATCCACAGCATTTCCGATGCGGCCCAATTGC AGACGTCCTCGGCGGGGCAGATCTCACACACCATGGCCGTCATCCAGCAGATCACCGCCCAGACGTCCGCAGGTTCCAGCGCCACCGCCGACAGCATTCG TCACCTTGCGCGCATGGCCAGCGAGATGCGTCGTTCGGTCTCCGGATTCACCCTGCCGGCACCTGCCGAGCCCCATTGAGAAATGCCCATGTCCACGCCC
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| DNA Sequence for Gene |
>H041_RS0105315
ATGCCCGGCCCCATTGCTGGCCCTGCCCGCCACGATACCGTGGGCCTGGCCTGGACCAAGGCTGCCCTGCTCGATTGCCTGGGGCAGGGGCGCCAGGCGC TGGAACGTTTTGCCGGCGAGCCTGAAGACCTGTCGTTACTCACCTTCGTGGCGGACAACCTGCACCAGGTACACGGTTGCCTGGTGATGCTGGAGTTGCC TGGGGCAACGCGCCTTGCCCAGGAGCTGGAGATGCTCGTGACCGACCTGGCCAACGGTAAGGTCACCCCGCGAGGCGACTGCCTGGGCGCGTTGTTCAAG GGCCTGGAGCTGTTGCCTTCCTACCTGGAACGTCTGCGCGGTGCACGCCATGACTTGCCACTGGTGATGTTGCCGCTCCTGAACCAGCTGCGTGCCTGCC GGGGCGCGGAACCGGTGGTTCATGGCCGCCTGCTCGGCAGTGCAGGCCAGCGTCTGGCAGGTGCCCAGGACCTGGCGAACCTTGACGTGTCATTGGGCAA CTGGCGCGAGCAGTTGCAGGCTGGGGAGGGCCGCGACGCGCTAAGGTCGGTAGTGGCGGCATTGTGTGACGACCTCATGCGCATCAAGGACCGCCTGGAC CAGTTCGTGCGCAGCGACCGGCAGCACAATGAACAACTGGAGGTGTTGCTCGCGCCCCTGCGCCACGTGGCCGATACCCTGGCCGTGCTGGGTTTCCAGC AGCCGCGTCGGGTCATCATCGATCAAGTGATGACGCTGCAAGGGCTGGCCGAGGGCGATCGGGCCGTGGATGACGCGGTGCTGATGGATGTGGCGGGGGC CTTGTTGTACGTGGAAGCCACGCTCAACGGCATGGTCGGGCCACTCGAAGAAGGGGGGGAGCCAGGCCTGCCGGGCGCCGATGTCGCCGAGATTCGCCTG GTCGTGCTGCGAGAGTCGCTGAACGTGTTGCAGCAGGCCAAGGACCTGATGGGCGATTGCCTGGAGTCGGGCTGGCCCCGTCAGCACCTGCAGGCCTTGC CAGGCTTGCTCCAGCAGGTGCGCGGCGCCCTGGCCATGCTGATGTTGCCGGCCGCTGCCGAGGTGTTCGCGCGCTGCACGGTGTTTGTCCAGGGCTGGGT ACAACAGGCGCAGGCCGACCCCTCGTCCGAGGAACTGACGCTGCTGGCCGAAGCCTTGAGCGCTGGCGAATGCTATCTACAATGGCGCGTGGCCGACCCA CTGGCCGACGCTCAGCGCTTCATCGTCATGGCTCGCGAGCGCCTGGGGGCGTTGGGCGTGCACTGTTCCACCGTTGAAGAGCATGCCGATCTGGAAGAGG CGGATGGCCTTCAGGACGAATTGCGTGGCGTATTCATCGAAGAAGCCCAAGCATTGCTTCAGGACATTGAGCGGCACTGGTTGACTTGGCGTGCCGACCA CCAGCAGCACAACGCGCTGATCGAAGTGCATAGGGCATTGCATACGCTCAAGGGCGCAGGCCGCCTGGTGCATGCCCAGGCGTTGGCAGAGCTGGCCTGG GCCGCCGAGCACTTGCTCAACCGTGTGCTTGCCGGCCGCAACGTGCTTGGTGCGGACGGGCAGATGGCGCTTGAGCAAGCGTTCGCGCAACTGCCCGAGG TGCTCGCCGACTTCGCCGCGGGGCACCTGCCGCATGTGAGCGCCGTACAGCAACTGGTGGGCCACCTGCATGCCCTTGCCGAGCGCGACCTGCCAGCCGC GGCCAGCGCGCAGGGGCTCGACCCGCAGTTACTGGACATCTTCCGTGGCGAGGCCCAAGGCCACCTGGCCAGCCTCGACGGGTTCCTGGCAAATGCCCAG CACGGCGTCCCTGTAGACGACGCCCTGCAGCGGGCCTTGCACACCCTCAAGGGCAGTGCGGCCATGGCCGGAGTTGTGCCCATCGCCGAACTTGCCACCG TGTTCGACCGACTGGTGCGCGAGTACAAGGCGCACGACCTGCTGCTCGATGAAACGGAGCTGCACTGGCTCAAGTCCGCCGCCTCGATGTTCGGGCAGGG CCTGGCGCAGTTATCCACCACCCCGTTCGAGCCACTGCCTGGTGCGGCCCAATTGATCGAGCAGGTCGAGTTGGCCATCGATACGCGCATCGCCGCCCTG GGCGGCGATGCGCATGCCTCGACCGGCAACGCCCGCGACCCGCAACAGGTCGCAGCTTTCCTGTCGCAAGCCATGGATCGTTTGCTGGACGCCGAGTCGT TGCTGGCCGACTGGCAGCGGCGCCCGGCTCAACGGGCGGCCTTGGAGACACTGCTCGATGACATGACCGAGCTTGCCCATGCCGCCCATTCGGCCGATCT GTGGCAGGTCGATGAGGTGTGCGAAGCCTTGCTGGACCTGTACGGTGCAGTGGAGGAGGGCAGCCTGCCTGCCGATGCGCAGTTCTTCACCCATGCCCAG CACGCCCACGAGGCGCTGCTGGACATGCTCGACGAGCTGGCTGCCGGCCAGGACGTCGTCCCGCGTACGCCGCTGGTGGCTCGCCTGCGCGAACTTCAGG GGCAAGGGCTTGCACCCGATGCCACCGGGCGCGTGGGCCTCGACAGCGTCACACCGCTGCACCCGGACATGGACGTGCAACTGATCGACACGCCAGCCCC AGACCTGGCCCTCGACCCCGCGCCAGTGCCGCCGTCACAAGCTCCGGAAAGCGCCGGGGAAGAGCTGATGGAGGTTTTCCTCGAAGAAAGCTCGGACATC GTCGAGAGCGCCGCTGCAGCGCTGGCGCGATGGCAGGCCGACCCGCGCAGCACGGTGGAGGTGGACAACCTGATGCGCGACCTGCACACCCTCAAAGGGG TGGCACGCATGGTCGAAATCGGCCCCATCGGTGACCTGGCCCATGAGCTGGAATTTTTGTACGAGTTGCTCGCGGCAGGGCGCCTGCCACCGAGCGGGGC CCTGTTCTCGCTGTTGCAGAACTGCCACGACCGCCTGGCGCACATGCTCGATGCGGTGCGCCTGGGGCAACCGCTGCACGCCGCCACGGCGCTGATCGAT TACATCCGCAACTTCAGCAGCGCAGGCCTGACCGACAGCGCGGCCGGCACCAGCCCGGTCGAAACTGCCGCCAGCGAAGGTCCGGCAGTAACCCCCGAGC GAGTGCCGGGGGACATGGTCAAGGTCGATGCCGAATTGCTGGACGACCTGGGCAACCTGGCCGGTGAGCACTCGATCATCCGTGGACGCATCGAGCAGCA GGTCAATGACGCCCAGTTCACCCTCAACGAAATGGAAACCACGCTCGAGCGCATGCGTGACCAGCTGCTGCGCCTGGATATCGAAACTCAGGGGCGGATC TCCAGCCGCCAGCAGCTGGAGGGCGATGTCTATGAAGACTTCGACCCACTGGAAATGGACCGCCACTCCCAGCTGCAGCAGTTGTCGCGGGCGCTGTTCG AGTCGGCCTCGGACCTGCTGGACCTGAAGGAAACCATGGCCCAGCGCGCCCAGGAAGCCTACGGCCTGCTCCAGCAGCAGGCGCGGGTCAACAGTCAGCT TCAGGAAGGCCTGACGGCAACGTTGATGGTGCCTTTCGAACGCCTGGTGCCGCGCTTGCAGCGCGTGGTGCGGCAGGTGGCGAGCGAGCTGGGCAAGCAG GTCGAGCTGGTGGTGGGCAACGCCGAGGGCGAGCTGGACCGCAGTGTGCTGGAACGCATGGTGGCGCCGCTTGAACACATGTTGCGCAATGCCGTCGACC ATGGCCTGGAAAGCCGCGAAGCCCGATTGGCTGCGGGTAAGCCTGAGCAGGGCACGATCCACCTGAACCTGCTGCACGAGGGGGCGGACATCGTCATCGA GATGACCGACGATGGCGCCGGCGTACCCCTACAAGCCGTCCGACTCAAGGCGATCAAGCGCGGCCTGCTCGACCCGCAGGCACAGCTGAGCGACCACGAG ATACTGCAGTTCATCCTCAGGCCGGGCTTTTCCACGGCCGAAAAGATCACGCAGATCTCAGGGCGAGGCCTGGGCATGGACGTGGTCCACGAGGAGGTCA AGCAGTTGGGCGGCTCGATGACCATCGAGTCGGCCCAGGGCAAAGGGGCGCGTTTTCAGATTCGCCTGCCGTTCACGGTGTCGATCAACCGCGCGCTGAT GGTGCACCTGGTCGACGAGCAGTACGCCATCCCGCTCAACACCATCGAAGGCATCGTGAGGGTACCGCCCGCTGAGCTGGCAGGTTGCTACGAGCAGGAG CCGCCGCGCTACACCTACGCAGGCCATCAGTACCAGCTGCGCTACCTGGGCGAGCTGGTGCAGGGCGCGCCGCGTCCTACGCTGCTGGGCCAGAGCGTGC CGCTGCCCTTGTTGCTGGTGCATTCACAGGAGCAGTCGTTCGCCATTCAGGTCGACAGCCTGTCGCCCAGCCGGGAGATCGTGGTCAAAAGCCTGGGCCC GCAGTTTGCGGCCGTTGCCGGCCTGTCGGGTGCAACGCTGCTGGGGGATGGGCGCGTCGTGTTGATTCTCGACCTGTTGGGGCAATTGCGTGGCCAGCAA CGGCGGCTTGCTCGTTTGCCTGGAGGCACGCCGCGTGGGTTGCTGCCGGCAGCGACCCCGGACCGCACCTTGCTGGTGATGGTGGTAGACGATTCGGTCA CGGTGCGCAAGGTCACCAGCCGCCTGCTTGAGCGCCATGGCATGAGCGTGATCACCGCCAAGGACGGGGTGGATGCCATGGCGGTGCTGGAAGGGCACCG GCCCGATGTGTTGCTGCTGGATATCGAAATGCCGCGCATGGACGGTTTCGAAGTGGCGACCCGCATTCGTCAGGACGCCCGCCTCAAGGCGCTGCCCATC ATCATGATCACCTCGCGTACGGGGCACAAGCACCGCGACCGAGCCATGGCCATCGGGGTCAACGAATACCTCGGCAAGCCTTATCAGGAGTCGGTCTTGC TGCACAGCATCCTCCGGTGGAGCCAGTCCCATGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACTGATAGCCGGGCAGCGCAGCAGCCTTACCGGGCTGTTGCTGCCATTGGGCGACCGTACGTTGGTGCTGCCCAATGTGGCCGTAGCCGAACTCAGTGGG CTGCGCAATGTAGCGTGTCAGCGCGGTGACCTGCCCTGGCACCTGGGCTGGGTCGACTGGCGCCAGCAGCGCTTGCCCCTGATCGGCTTCGAAGCGGCCT GTGACAGCCATACGCCCTGTGGAGAACGGGCCCGTGTGGTGGTGCTCAACGCACTGGGCGACACGGGGTTGCGTTACCTGGCCTTGTTGCTGCAAGACAT ACCGCGCTCGTGCAAGCTCGACAGCCAGCTCAACTACGTTGACGTGGCGTTGGCACCCCTTGAGTTGGCCGCTGTCCAGGTAGGGGATCAGGTGGCGCGC GTGCCTGACCTGGTCGGGCTCGAGCGCCTGGTCAGGGACGCACAGCGCAGCGGCAGGCTGCAAACGCCGGGTTAGAGCGTGCCGCCGGTACGCGTCGAGT
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| Amino Acid Sequence |
>chemotaxis protein CheA
MPGPIAGPARHDTVGLAWTKAALLDCLGQGRQALERFAGEPEDLSLLTFVADNLHQVHGCLVMLELPGATRLAQELEMLVTDLANGKVTPRGDCLGALFK GLELLPSYLERLRGARHDLPLVMLPLLNQLRACRGAEPVVHGRLLGSAGQRLAGAQDLANLDVSLGNWREQLQAGEGRDALRSVVAALCDDLMRIKDRLD QFVRSDRQHNEQLEVLLAPLRHVADTLAVLGFQQPRRVIIDQVMTLQGLAEGDRAVDDAVLMDVAGALLYVEATLNGMVGPLEEGGEPGLPGADVAEIRL VVLRESLNVLQQAKDLMGDCLESGWPRQHLQALPGLLQQVRGALAMLMLPAAAEVFARCTVFVQGWVQQAQADPSSEELTLLAEALSAGECYLQWRVADP LADAQRFIVMARERLGALGVHCSTVEEHADLEEADGLQDELRGVFIEEAQALLQDIERHWLTWRADHQQHNALIEVHRALHTLKGAGRLVHAQALAELAW AAEHLLNRVLAGRNVLGADGQMALEQAFAQLPEVLADFAAGHLPHVSAVQQLVGHLHALAERDLPAAASAQGLDPQLLDIFRGEAQGHLASLDGFLANAQ HGVPVDDALQRALHTLKGSAAMAGVVPIAELATVFDRLVREYKAHDLLLDETELHWLKSAASMFGQGLAQLSTTPFEPLPGAAQLIEQVELAIDTRIAAL GGDAHASTGNARDPQQVAAFLSQAMDRLLDAESLLADWQRRPAQRAALETLLDDMTELAHAAHSADLWQVDEVCEALLDLYGAVEEGSLPADAQFFTHAQ HAHEALLDMLDELAAGQDVVPRTPLVARLRELQGQGLAPDATGRVGLDSVTPLHPDMDVQLIDTPAPDLALDPAPVPPSQAPESAGEELMEVFLEESSDI VESAAAALARWQADPRSTVEVDNLMRDLHTLKGVARMVEIGPIGDLAHELEFLYELLAAGRLPPSGALFSLLQNCHDRLAHMLDAVRLGQPLHAATALID YIRNFSSAGLTDSAAGTSPVETAASEGPAVTPERVPGDMVKVDAELLDDLGNLAGEHSIIRGRIEQQVNDAQFTLNEMETTLERMRDQLLRLDIETQGRI SSRQQLEGDVYEDFDPLEMDRHSQLQQLSRALFESASDLLDLKETMAQRAQEAYGLLQQQARVNSQLQEGLTATLMVPFERLVPRLQRVVRQVASELGKQ VELVVGNAEGELDRSVLERMVAPLEHMLRNAVDHGLESREARLAAGKPEQGTIHLNLLHEGADIVIEMTDDGAGVPLQAVRLKAIKRGLLDPQAQLSDHE ILQFILRPGFSTAEKITQISGRGLGMDVVHEEVKQLGGSMTIESAQGKGARFQIRLPFTVSINRALMVHLVDEQYAIPLNTIEGIVRVPPAELAGCYEQE PPRYTYAGHQYQLRYLGELVQGAPRPTLLGQSVPLPLLLVHSQEQSFAIQVDSLSPSREIVVKSLGPQFAAVAGLSGATLLGDGRVVLILDLLGQLRGQQ RRLARLPGGTPRGLLPAATPDRTLLVMVVDDSVTVRKVTSRLLERHGMSVITAKDGVDAMAVLEGHRPDVLLLDIEMPRMDGFEVATRIRQDARLKALPI IMITSRTGHKHRDRAMAIGVNEYLGKPYQESVLLHSILRWSQSHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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