Pseudomonas sp. URMO17WK12:I3, H038_RS0106615
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I3 H038DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGCCGGGCGAGTACCCGGTGTACGAACACGACGACCTGACCAGCACCTTCGCACCGGTGATGCTGGCGCTGCGTCAGGCGCTGTCGATGGTCATCGA CAGCCGCGCGATCCCGATTCCGATCATCGAGAAATCCTACGGCGTGCACGTGGCGATGCTCGCCGACAAATCGCTGCTCGACTCGGCCAGTTTCATCCTC GTGGTGCGTGCCGATGTGCCGGGCGAAAGCCTGCGCGGGCATTTCCCGCAGCAGGCGAAGATCGGCTCGGTGGAGCACATCCGCGACCTGGTCAACCTGC AGCTGCCGGGCATCGGCCTGCTGCCGCTGCCGGTGGCGCCGCGCCAACTGCCGTACCACGCCGGTTCCAACTACTTCGAACTGGACCGGGGCAGCGATCA CTGGAAACAGCTGATCCACTCCGGCGGTTTCGCTTTCCATATCGCAGGCCAGTTCCCGGGCCTGAACCTGGCCTTCTGGGCCATCCGAGGCTGACGCGCG
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| DNA Sequence for Gene |
>H038_RS0106615
ATGACCATCGACGATCCATTTGGCGCCTTGCCCGGCCAGCCCGGCAAGGGCAGTGACCCGGCTAACGACCGCACCATGATCATGCCGCGCCCCGGTGGCC GTGCGGCCGAGCCGGCGCGCCCGGCACCTGCCGGCTCGCCGCCGCCAGCCATGCCCAGCGCGCCGCCGCTGGCTGCCCGTGGCCTGGGCCTGAACCCCAT CGAAGCCGCTGCAGGCCCCATGCTGGGGCTGCTCACCCGCCTGCGCAGCACCATTTCCCATCCCGCGCCGGCCAGCCTGCGCGCCCAGCTGCTCGGCTAT CTGCGCCAGTTCGAGGACAAGGCCCGCGCCGCCGGCGTGGCCCAGGACGAAGTGATGCTGGCGCGCTACGTGCTGTGTACCGCGCTGGACGAAGCGGTGA TGAGCACACCCTGGGGTAGCGGCAGCGAATGGAGCAAGCAGAGCCTGCTGATCACCCTGCACAACGAGGCGTGGGGCGGCGAGAAGGTGTTCCAGCTGCT CGACCACTGCCTGCAGAACCCCCGCCAACGCCTCAACCTGCTGGAGCTCCTGTACCTGTGCATCAGCCTTGGCATGGAAGGTCGCTACCGCGTCATGCAG GACGGCCGCAGCCAGCTCGACGCCTTGCGCGAGCGAGTGGCCGCGACCATTCGCAGCACCCGAGGCGAGATCGAGCGCGAGCTGTCGCCGCACTGGCGCG GCCTGGTGGTCGCCCGTGATCGTCTGCGCCAGTTCCTGCCGCCCTGGGTGGCGGTGGCCATCGGCCTGGCGATTCTGCTGGTGCTGCTGTTCGGCCTGCG CATGAAGCTGGCCGCCGAGGCCGAGCCGGTGTTCCGCAACCTGCACGCTCTGGGTGATGTGCCGGTGCAGACCATCGACCGCCCGGCTCAGCAGCCACGC ATCGTCGAGCGCCCGCGCCTGGCCGGTTTCCTGGCCGAGGAAATTCGCGCGCAGAAAGTCGCGGTGGAAGATGCTGTCGACCGTTCGGTGGTGACCATCC GCGGCGACCAGCTGTTCGCCTCCGGCAGTGCGACGATCGCCGATGACTTCCAGCCGCTGCTGCTGCGCATCGCCGAAGCCATTCGCAAGGTCAACGGCCA GGTGCTGGTCACCGGCCACAGCGACAACCGGCCCATCGCCACGCTGCGCTATCCGTCCAACTGGAAGCTCTCCCAGGACCGCGCCCAGCAGGTGATGGAC GTGCTGGTGGCCAAGACCGGCCAGCCCGCACGCTTCCGTGCCGAAGGGCGCAGCGATACCGAGGCGGTGGCATCCAACGACACGGCAGAAGGCCGTGCGC GTAACCGCCGCGTGGAAATCACAGTTTTTGCGGAGGGCGTCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGCGTTTTTCGGTTTCATGGCCCGTTGGGTCATGCCGGTGCTGGGCCTGGTCGCGCTGGCACTGGTGATCTGGTTCGTTGGCCCGTTGATCGCCATCGG CGGTTTCGAGCCACTGGCGGGCACCACCGCACGCTGGACGCTGATCATCTTGCTGTTCGCTGCCTGGGCAGCCTGGCGGGTGCTGCGCATCATCCAGGCA CGGCGCAATGCCGCCAGGGTCATGCAGGGTCTGGTCGACGTGGCGCCGGACCCCACCAGCGTGGCCACCGCCGAGGAGCTGGCCACCCTGCGCCAGCGCA TGGACGAAGCCCTGGGCCTGCTCAAGCGCGCCAAGCTGGGCGGCGGTGAGCGGCGTAATCTCTACGAACTGCCGTGGTACGTGATCATCGGTCCGCCCGG TTCCGGCAAGACCACCGCCCTGGCCAATTCCGGGCTGCGTTTCCCGCTTGCCGAGCAGATGGGCGCCGGCGCCGTGCGCGGCGTGGGCGGTACCCGTAAC
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| Amino Acid Sequence |
>hypothetical protein
MTIDDPFGALPGQPGKGSDPANDRTMIMPRPGGRAAEPARPAPAGSPPPAMPSAPPLAARGLGLNPIEAAAGPMLGLLTRLRSTISHPAPASLRAQLLGY LRQFEDKARAAGVAQDEVMLARYVLCTALDEAVMSTPWGSGSEWSKQSLLITLHNEAWGGEKVFQLLDHCLQNPRQRLNLLELLYLCISLGMEGRYRVMQ DGRSQLDALRERVAATIRSTRGEIERELSPHWRGLVVARDRLRQFLPPWVAVAIGLAILLVLLFGLRMKLAAEAEPVFRNLHALGDVPVQTIDRPAQQPR IVERPRLAGFLAEEIRAQKVAVEDAVDRSVVTIRGDQLFASGSATIADDFQPLLLRIAEAIRKVNGQVLVTGHSDNRPIATLRYPSNWKLSQDRAQQVMD VLVAKTGQPARFRAEGRSDTEAVASNDTAEGRARNRRVEITVFAEGVE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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