Pseudomonas sp. URMO17WK12:I12, D882_RS01000000131005
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I12 D882DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGCGTTCATGCAGCGGCTGGCGAAGAGCGAGGAGGGCCGCGAGGTCAGCACCAGGGTGTCGATGCGCAAGCCGATGCTGCGCATGCGGCCGATGACGT CCAGCCCGTCGAGCAACGGAATGCCGATGTCGATGATGGCGATGTCCGGCATCGCCTCGCGGGCCAGCTTGATCGCGTCGATGCCGTTGTCGGCCTCCGC GACTATCTGGTGACCCTCGCGCTCCAGGATCACCCTGACCGCCAGACGTACAGTGGGATGATCGTCGACAATCATTATCTTACTCATGGTTACCTCGAAG GCTGCACGCCAATTCAATTTAATCCAACTCACTTTAATCCAACCCGCCGCAACGGGTAGGGGAACACTGCATATTTTCTCGGATTATCCCGCGTGCTGAA AGGCGATTTCCCGGAATAGGGAAAACCCTACAAGGGCTTAGGGGAAGTCTGTTCCGGGTATTGTGTAGCTTTGCCGGCATGCAACCTATGGGGACAAATC
|
|
| DNA Sequence for Gene |
>D882_RS01000000131005
ATGCAAACCGGCAAGGTCATTCTGCTCGAGGACAATCGTTTTCAGCGTGCCGTCCTGCGCGCCACGCTCGGGTTGATCGGCGTTACCGACGCGCTGGAAG CGGGCGATGGGGCGGAGGCGCTTGCGCTGTTGCGTGCCTGTGGTGGTGTGCGTCTGGTGATCTGCGATCTGCAGATGGCAGGCATGGATGGCCTGGCCTT CCTTCGGCGCGCCGCGCAAGAGCGGCTGGTGGAAGCGGTGATCATCTGCAGCGATATCGAGCCCTCGCTACGCTGTGGCGTCGCCGCCATGGTGGCGGGG CTGGGGCTCGCCTATATCGGTGACCTGGGCAAGCCGTACACGCTGCGCAAGATCGCTGCGCTGATGGAACGTGCAGCGGCAAGCACCCCCCACCCGGCTG TGGTGTCTGGCGTACCGCCTGCACAGCCCGGGTTTGCCGAAGTGCGGCGTGCCCTGCTGGAGGATGAGTTCGAACCTTTCTTTCAGCCCAAGCGCGACAT CCAGCTCAACCGCGTCGTCGGCGTCGAAGTGCTGGCGCGCTGGCGTCATCCGCAGCAGGGGCTGCTCGGCCCGGCGGCGTTCCTGCCGGTCATCGAGGCG TACGGCTTGCTCGACGAACTGTTCTGGGCAATGTTCCTGCCTAGCCTGAAGTTCCAGTGTTCCCTGCGTCAGCGCGGTATTCACCTGCCCATGGCGTTTA ACGTTCACACCGCGCAACTGGAATCGCAGCATCTGGTCGAGCGCATTCGTGCCGCGCTGGCCGAACATTGGCTGCCGCCGGGCGCCATCACCCTGGAACT GACCGAGACCGGCGAGATCGCCGACCTGCCCGCCGCCCAGGAAGCGCTGCTGCGCCTGCGCATGCTCGGCTGCAAGGTGTCGATGGACGACTTCGGCTTG GGCTTTTCGTCGTTGAACCGGTTGTGCGAGCTGCCGTTCAACGAGGTGAAGCTCGATGCTGCCTTCATTCGCGCCAGCGATCTGCAGCCACGTAGCGTGG AGGTTATCCGGTCCGCGGTGGACATGGCGCGCGCCATGGGCGTCGAGCTGGTGGTGGAGGGCGTCGAGACGCCGGCGCAACTGGCCTTGCTGTGCTCGCT CGGTTGCCGCTATGCCCAGGGCTATCTGCTTGGTCGGCCGATG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGGCGATCGATATCGCGGCGATGGCTGAATTGACGGCCGACGTGTTGCCCGAATTGCTCCAGCAGTGACGAGTCAGCCCAGCACCGGGCGCCCTGGCGC AAGGGGTGCGGCGCCCGGTCCTGGCACCTTTTTCCGCACTCGTGCCGGCGGTGCTGCCCGTCGCGAACCCGAGTGCCTTTGCAGATGAACAATGAATACC GATGCCGCGTATCCGTCGGCACGGCCATTTTCTTTAGGGCTCAGTTGGGCCGCAACCGAGGGGAATCATGCGTTTCGCAAAAACCATCATGGTCATGCTC TTTCTGTCCGGTGCCACGATCGTCACGGCCGAACAGGGCGGTCTTCAGGAGGACGCCGGAGGCGCTCGCGGGGAGCGTGAGGAGGGGCGGGGCGGGCAGC CCGACCTGTCCCTGCGCGGCGCGCTTGCCAAGCTACGGCGGGACGAAGCGAAGCAAAATCGGCTTCAGCGCCTGAATCGCCAGGCCGATGTCGAGGCGGG
|
|
| Amino Acid Sequence |
>hypothetical protein
MQTGKVILLEDNRFQRAVLRATLGLIGVTDALEAGDGAEALALLRACGGVRLVICDLQMAGMDGLAFLRRAAQERLVEAVIICSDIEPSLRCGVAAMVAG LGLAYIGDLGKPYTLRKIAALMERAAASTPHPAVVSGVPPAQPGFAEVRRALLEDEFEPFFQPKRDIQLNRVVGVEVLARWRHPQQGLLGPAAFLPVIEA YGLLDELFWAMFLPSLKFQCSLRQRGIHLPMAFNVHTAQLESQHLVERIRAALAEHWLPPGAITLELTETGEIADLPAAQEALLRLRMLGCKVSMDDFGL GFSSLNRLCELPFNEVKLDAAFIRASDLQPRSVEVIRSAVDMARAMGVELVVEGVETPAQLALLCSLGCRYAQGYLLGRPM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|