Pseudomonas sp. URIL14HWK12:I4, H025_RS27945
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URIL14HWK12:I4 H025DRAFT_scaffold00008.8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACGGCGTTGAAGACCTCAAGGACCTGGAGCCGGGCATGATCCTCGAAGGCGTGGTCACCAACGTCACCAACTTTGGCGCCTTCGTCGACATCGGCGTAC ACCAGGACGGCCTGGTGCACATCTCGGCGCTGTCGGAAAAGTTCGTCAAGGACCCGCGTGAAGCGGTCAAGGCTGGCGACGTGGTCAAGGTCAAGGTCAT GGAAGTGGACATCCCGCGCAAGCGCGTCGGCCTGTCCATGCGCATGAGCGACACACCGGGCGAAAAGGTCGAAGGCAACCGCGGCGGCAACCGTGGCAAT GGCGGCAACCGTCAGCAGCAGGCCCCGCGCCAGCGTGAAACCGCCACTGCCGCACCGGCCAACAACGCCATGGCCGCCCTGTTCGCCAACGCCAAGCAGC TGAAGAAGAAGTGATGGACGTACCACGCGAATACGTCGAGAGCGCCTTCAGCCAACTGCTGGGCTGCCGCCTGCAACGCCTGGAAACCGGTGTTGCCGAG
|
|
| DNA Sequence for Gene |
>H025_RS27945
GTAGCCCTGGCGCTTGAGCCGCACTTGCGCAACCGGGGCCAGAAGCTGCACGGCGGGGCGATCTTCAGCCTGGTGGACATCGCCATGGGCCTGGCCTGCT CGGCCAACCATGGCTTTGACCGGCAAAGCGTCACCATCGAGTGCAAGATCAACTACATGCGCGCCGTCAGTGACGGCGAAGTGCTGTGTACCGCCCGCGT GCTGCACGCCGGGCGGCGTACCCTGGTGGTCGACGCTGACGTAGTCCAGGGCGACAAACTGGTGGCAAAAGCGCAAGGAACCTTCGCGGTTCTCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTCACCAAGCTGTATCTGCGGTATTTTCAGCAGTGCGCTGGCACTGCTGGAACCGCGTAAACCAGGCGACAACGCCAGTTCCTTTCTTCCTACCCTTGTA GACCGTTATCTCTACCCCCATATTGGGGCGACTGACGCGTGAAGGAATACATCTTGAGCGACCTCCTCAACCGCCGCCTGAGCCTGCTCGGCGCCAATCT CTCCCTGCTCAAGCAGTGCCTGCACGGTATTGAGCGCGAATGCCTGCGCGTGACCGACGAAGGTCGCCTGGCCCAGACCCCGCACCCGGAAGCCCTGGGG TCGGCGCTGACCAACGAGCAGATCACTACCGATTATTCCGAGTCGCTGCTGGAGTTCATCACCCCAGCCCTGCCCGACCCGGCCAAGGTGCTCGAAAGCC TCGAACAGACCCACCGCTTCGTCTACAGCAAGCTGGGCGACGAATACCTGTGGAGCCCGTCGATGCCGTGCACGCTGCCGGCCGAAGAGGACATCCCGAT
|
|
| Amino Acid Sequence |
>hypothetical protein
VALALEPHLRNRGQKLHGGAIFSLVDIAMGLACSANHGFDRQSVTIECKINYMRAVSDGEVLCTARVLHAGRRTLVVDADVVQGDKLVAKAQGTFAVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|