Pseudomonas sp. LAIL14HWK12:I7, D886_RS0105960
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. LAIL14HWK12:I7 D886DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATTGAATGCCTGTCGAGGAAATCATGGCTAACGAAAACGAGATCACGTCCCCGGAAGACCAGGCCCTGGCCGACGAATGGGCGGCGGCGCTGGAAGAAAC CGGTGATGCCGGCCAGGCCGATATCGACGCGCTGCTGGGCGGCGACACCGGCAACAGCGGCGCGGGCCGCCTGCCGATGGAAGAGTTCGCCAGCTCGCCG CGGCCTAACGAGAACGTCAGCCTCGAAGGCCCTAACCTGGACGTGATCCTGGACATTCCGGTGAACATTTCCATGGAAGTGGGCAGCACCGAGATCAACA TCCGCAACCTGCTGCAGCTCAACCAGGGGTCGGTGATCGAGCTCGACCGCCTGGCCGGCGAGCCGCTCGACGTGCTGGTCAACGGCACGCTGATCGCCCA TGGCGAAGTGGTGGTGGTCAACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCCAGCGAACGTATCAAGAAGCTGCGCTGAGTGAAGGGCACG
|
|
| DNA Sequence for Gene |
>D886_RS0105960
ATGCGCGCCGGCGCTGCTTTTGCCGGGCTGCTCGCCAGCCAGTGGGCCTGCGCGGCGGCCAACCCTGCGGCAACCACCGCTGCCGCGCCTGGCAGCCTGG GTGGGCAACTGGCGCAGATGGTCTTTGGCCTGCTGTTGGTGGTGGGCCTGATCTTCTTCCTGGCCTGGATGTTGCGCCGCATGCAAGGCGCGGCGGTCAA AGGTGGCCAGGTGATCGAGATCGTCGGCAGCCGGGCCATTGGCCCGCGTGACCGCCTGTTGCTGGTGCAGGTCGGCAAGGAGCAGATCCTGATCGGCCAC ACCCCAGGCAGTATCGAGGCCCTGCATGTGCTGGCCGAACCCGTCGAAGTGCCCGCAGCTGCCCGTCAGGCAGCGCCGGAGTTTGCCCAGCGGCTGATGG AGCTGATGGGCAAGGACCAGAAGGACAAGAAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGACCGGCGTGCTGCGCATGATGTTGACCCTGGCGCTGCTGCTGGCCGCGCCATTGGCCCTGGCCGCCGACCCGCTGTCGATCCCGGCCATTACCCTGTC CAATGGGGCAGACGGGCAGCAGGAGTATTCGGTCAGCCTGCAGATCCTGCTGATCATGACGGCGCTGAGCTTTATCCCGGCGTTCGTCATCCTGATGACC AGCTTCACCCGCATCATCATTGTCTTCTCGATTTTGCGTCAGGCCCTGGGCCTGCAGCAGACGCCTTCGAACCAGATTCTGACCGGCATGGCGCTGTTTT TGACCATGTTCATCATGGCGCCGGTGTTCGACCGGGTGAACCAGGATGCGCTGCAGCCCTACCTGAAAGAGCAGATGACTGCCCAACAGGCCATCGACAA GGCCCAGGGGCCGCTCAAGGACTTCATGCTGGCGCAGACCCGGCAGAGCGACCTGGACTTGTTCATGCGCCTGTCAAAGCGCACCGACATCGAAGGCCCT
|
|
| Amino Acid Sequence |
>flagellar assembly protein FliO
MRAGAAFAGLLASQWACAAANPAATTAAAPGSLGGQLAQMVFGLLLVVGLIFFLAWMLRRMQGAAVKGGQVIEIVGSRAIGPRDRLLLVQVGKEQILIGH TPGSIEALHVLAEPVEVPAAARQAAPEFAQRLMELMGKDQKDKK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|