Pseudomonas cremoricolorata DSM 17059, H618_RS21430
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas cremoricolorata DSM 17059 H618DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGCGAGCCTTGTCTCACTGAGTCTGCTGGGCGTGAGGGGTGATTTAGCCTCAGTCTGCGCTGTAGTGGAAATTTCCTACGAAGCAAGAGGAAAGTGCTA CATAGAATTCTGCGTTGGCTTATGAGGTAATGTCTCACTCTTGACTCGAAGACAGCCCTCACATGCTCTGCTTGACCGTACAGTTTGCAAATCTGTCCAT ATCCATTCTTATTGCTTCAATAGGCGCTGAAGAAAGCACTTCATGCTGGCGGTGAGCCAGCGGTGATGTGCTTTCTGGCGCCTAGAATTTGGCTGAGAAA TTGATCGAGGCACTTAACAAATTTATCCAGCACTTTTGCCACGCCTAGACTACGCTCATGTCTACGATAAATGTTGGGCTGCTCAAGGGGTTTAAATGGG CGTCCTCACAAGTATCCCGGTATAGCTACCAGTGGTCTGATCTAATTGATCTTCACTGGACAAATTGCAGATGTTGGAAAAACGTGGGGCTGAGGGCCGA
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| DNA Sequence for Gene |
>H618_RS21430
ATGCGCAATGACAGTGGGCGTGCGAGTAGAGCTGAGGATGTGGATCTTGTTGAGGTCATGCTTCAAGTCTGGCGGCAACGATGGACAGTGCTTGTCATTG CTTTGGTAATTACACTCTGTGCTTGCGCATACGCTTACTTGGCCAAGCCGATATATGAAGTCAAACTTCGAATACTGCCTCCCGTAGCCAGTGATATTGC TGAGCTCAACTATGGTCGAGACAAATTATCCAATTTGGACGTCATCGGCGTGAAGCAAGTTTTTTCTGTGTATTTGCAACACGTCAGGAGTGAAAGCGTA AACCGCACGTTTTTTCAGACTGTCTACTTGCGCTCCATAGGCGTGGATGCCGCAGCAGGCTGGCGCAATGATTTGTACCAGGATTTTATAAGGTCGCTGG ATGTAACACCCATCAGCGATACGCTCGGCGATCATCTCCAGCTTTCATTGCGCGGCTCTGATCCTCACCGGCTTGCCGATTGGCTAATGGCGTATGCCAG CCTGGCCGGAGATGCCGCCAAGGATGAAATCGTTACTAATGTAAGGCGGGAGGTAGAGGTTAGAGCTGAAGGCGTCGGCCAGCAGATCGAAGTGGCCCGT CTAAAAGGCAGCAAAAGTCGCGAAGACAAAATTGTTCAACTCCGCGAGGCGTTACGGATCGCAACGTTGTTAGGTCTTGAAAAGCCGATGCTTATCAACG ACGGGCGATCTGCAGTAACACCTCGGATGGGGGATGATTTGACCTATATGAGAGGCGCAAAGGCGCTGCGTGCTGAAATCACAGGTCTTGAAAATCGTGC GAATGACGATCCATTCATCAATGAGCTCCGCGGTTTGCAGGCTAGGCAAAGATTGTATGAGGAGATCGCCGCTCGGCAGCCTGATATCGTCGTGTTTCAG GTCGATGGAGCAGTTGAGCAACCTGAGGTGCCCATCAAGCCCAAGCGCTTGACCATTGTGATACTAGCGCTTATCGCTGGCTTGTTTATTGGCAGTTTGG TGACATTGATTCGATAT
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGTTCAGTCACTACAAGCTGTCCCATGCCAGAGGACTTTGAATGAGCAGGTCCTCATTTCAAGACGGCCGCCTGTCGTGTGCGAGCTGCAACGAAGAAG AGGTTGAGGGCGGCAGGCATGTGGGGCGCGGATCGGGCTATTGGCTTCCCGTCTCCAACGACTGGGATGAATACTTGGAAGATTTAGCGACGTTTAACTC ACAGCGTAAGGGTTGGTCATGAAGTTTGTCCGTTCCACGATCCCTGAGGTCGTGATTATCGAGCCGTCGCTGTATGGCGATGATCGAGGTTGGTTTATGG AAACGTTCAACGAGCCGCGTTTCCACCAAGGACTGCGAGAGTTGGGTTTGCCCGTGCCACGTGCCTTTGTACAGGATAATCACTCGTGCTCGCGACGAGG GGTCCTGCGTGGCTTGCATTATCAACGCGCGCCACATGCTCAAGGTAAATTGGTGCGCGTTACAAAGGGGGCCGCATTTGACGTGGCGGTAGATATTAGA
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| Amino Acid Sequence |
>hypothetical protein
MRNDSGRASRAEDVDLVEVMLQVWRQRWTVLVIALVITLCACAYAYLAKPIYEVKLRILPPVASDIAELNYGRDKLSNLDVIGVKQVFSVYLQHVRSESV NRTFFQTVYLRSIGVDAAAGWRNDLYQDFIRSLDVTPISDTLGDHLQLSLRGSDPHRLADWLMAYASLAGDAAKDEIVTNVRREVEVRAEGVGQQIEVAR LKGSKSREDKIVQLREALRIATLLGLEKPMLINDGRSAVTPRMGDDLTYMRGAKALRAEITGLENRANDDPFINELRGLQARQRLYEEIAARQPDIVVFQ VDGAVEQPEVPIKPKRLTIVILALIAGLFIGSLVTLIRY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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