Pseudomonas resinovorans DSM 21078, G559_RS0120515
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00028.28_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCATCTTGAGCACATACTCGATGGCCGGGCCTTTTCCTCCGATCTGCGGGGATTCAACGCTGCCGGTGATTGGCAGCACTTCCAGGTAGAGGTCATG GGTCAGGCGCTGGTTGAGGCGCAGCTCTTCTTCGCAGAAATGTCGGCGGTCTTCGAGGTTGGTGAAGTCGAGGAAGCCGAAGTTCACCGGCTTCTTCACC TTGTACACGTAGCTGCCGGTCAGCAGTACCCAGGATATGTGCGTCTCGATCACCTGGAACCCGTCCACCGCGTGGGGGTAAAGGGCGGGATTCTGCAGGG CGGCTAGCAGGGACTGGCTCACGGGCATTCCTTGTTCTGTCTCTGTGGAAGACCGGCATTATCGCCTCTGTGCGCCGGCCTGCAAACCGTCAGGGCGTGC CTGTTGGCTGTGGATAAAGTGCGTATAATGCGCCGCCATGACACGTCCCCGATCCCCCAAATCCCGCTCAAAACGCCGTTCTAGCGGCCTTCGCCCATGG
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| DNA Sequence for Gene |
>G559_RS0120515
CTGGGCTGGGCCTTCAAACTGGGTCTCGTAGGCCTGGTGGTGCTGGCCGGTTTCGCTATCTACCTCGATGCCGTGGTGCAGGAGAAGTTCTCCGGCAAGC GCTGGACGGTGCCGGCCAAAGTCTATGCCCGTCCACTGGAACTGTTCGTCGGGCTGAAGCTGTCGAAGGACGACTTCCTGAAGGAACTGGATGCCCTGGG CTATCGCCGCGAGAGCCTGTCCAATGGCCCGGGTGCCGCTTCGGTGTCGGGTAACAACGTCGAGCTGAACACTCGCGGCTTCCAGTTCTATGAAGGCGCC GAACCGGCCCAGCGTGTGCGCGTGCGCTTCTCCGGCGACTACGTGGCAGGCCTGACCCAGGCCAGCGGCGCCGATCTGGCAGTGGCCCGCCTGGAGCCCC TGCTGATCGGCGGTCTCTATCCCGCCCACCATGAAGATCGTGTGCTGATCAAGCTGGACCAAGTGCCTGCGTACATGGTGGAAACCCTGGTGGCGACAGA AGACCGCGAGTTCTTCAACCATCACGGTGTGTCTCTCAAGTCCATCGCCCGTGCCTTCTGGATCAACGCGACCGCCGGCGAGCTTCGCCAGGGCGGAAGC ACCCTGACCCAGCAGTTGGTCAAGAACTTCTACCTGACCAGCGAGCGCACCATCTCCCGCAAGGCTACGGAAGCCATGATGGCCGTGCTGCTGGAGCTAC ATTACGACAAGCGTGAAATCCTCGAAGCCTACCTCAACGAGGTGTTCCTCGGTCAGGATGGCCAGCGCGCCATCCATGGCTTCGGCCTTGCCAGCCAGTA CTTCTTCAGCCAGCCGCTGGCGGAGCTCAAGCTGCACCAGATCGCTCTGCTGGTGGGCATGGTCAAGGGACCGTCCTACTACAACCCGCGTCGCTTCCCG GAACGCGCGCTGGAGCGCCGCAATCTGGTGATCGATCTGCTGGCCGAGCAGGGTGTGGTCACTCCAGAGGAGGCGGCTGCCGCCAAGCAGAAGCCGCTTG GCGTGACACGGCGCGGCAGTCTGGCTGACAGCTCCTACCCAGCCTTCCTCGACTTGGTGAAGCGCCAGTTGCGTGAGGACTATCGCGAGGAAGACCTGAC CGAAGAGGGGCTGCGCATTTTCACCAGCTTCGACCCCATCCTGCAGTCCAAGGCTGAAACCGCACTGAGCGAAACCCTGAAGCGCCTTTCCGGGCGCAAG GGCGTGGATCAGGTGGAGTCGGCCATGGTCGTGAGCAATCCGGAAACCGGTGAGATCCAGGCGCTTATCGGCAGCCGACAGCCACGCTTCGCTGGCTTCA ACCGCGCGGTAGATGCGGTGCGGCCCATTGGTTCGCTGATCAAGCCGGCCGTGTACCTTACTGCTCTGGAGCGCCCGAGTCAGTACACCCTGACCAGTTG GGTTGCCGACGAACCCTTTTCTGTGAAGGGGCAGGATGGCCAGGTGTGGCGTCCGCAGAACTACGATCGCCGCGCCCACGGCACCATTTACCTGTATCAG GGGCTGGCCAATTCCTACAACTTGTCGACCGCCAAGCTCGGCCTGGAACTGGGCGTGCCCAATGTGCTCAAAACCCTTGAGAGACTGGGTGTTTCCCGCG AGTGGCCGGCTTATCCCTCGATGCTCCTCGGTGCTGGCGCGCTGAGCCCGATGGAAGTGGCGACCATGTACCAGACCTTGGCAAACGGTGGTTTCAATAC ACCGTTGCGGGGGATTCGCAGTGTGCTGACTGCCGAGGGTGAGCCGCTCAAGCGCTATCCCTTCCAGATCCAGCAACGCTTCGATCCGGGTGCCATCTAT CTGGTGCAGAACGCCATGCAGCGAGTCATGCGCGAAGGTACTGCGCGGTCGGTGTACAGCCAGCTGCCATCGTCCCTGACACTGGCGGGCAAGACCGGCA CCACGAACGACTCGCGGGACAGCTGGTTCGCCGGCTTCAGTCAGGATCTGCTGGCAGTGGTCTGGCTGGGGCGCGATGATAACGGCAAGACGCCGCTGAC TGGCGCCACCGGTGCGCTGCAGGTCTGGACCAGCTTCATGCGCAAGGCTGACCCGCTGCCGCTGGACATGCCCATGCCGGACAACGTGGTGCAAGCGTGG ATCGACCCGCACAGTGGTCAGGGTTCTGACCCGAGTTGCCCGGGCGCAGTCCAGATGCCCTACATTCGTGGCAGTGAACCTGCCCCTGGCGCAGCTTGCG GCATGGGCGCACCCGTGGACTCGGTCATGGACTGGGTTCGTGGTTGGATGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGAGAGGATGAAAAGTGAGTAAAGCCTGGATTCCTGCCCTTGCGGCAGCCGCTCTGCTGGCAGGTTGTGCCACCCCGCAGCGAGGCGCCATTCCCGTG GTTGACTCCGGTGCGCCCTTGTCTGAACTGGAACAGGGAACCTCCAACCGCGGTGGCTACAATCAGACGCCCGCCGCCCCGCGCAGCGTGCCCGAAGATT CCGGCGTGGTGGTGATGGTGCCTGGTGCCGCCTCCGGCGCACCCATTGCGGCGCCGGCGTCCAGCGCGCCCATCAGCGGCAGTATCACCAGCGGCGGAAT TACCCCCGGTCCAATCACCACTGGCCCAACAGTGACGGCACCCAGCGCACCCGTCTATGGCTCGCCCAGCTACGGCTCTCCGAGCTATAGCGCGCCAGCG CCCATCGCTCCAAGTGGTATTCCCGGCAACGGTGGTGGATTGGCCGCCGACGAGCAGCTCGATGGCCCGGTGCTGGCGCTGCTGACCACTGCCCAGCAGC
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| Amino Acid Sequence |
>penicillin-binding protein
MGWAFKLGLVGLVVLAGFAIYLDAVVQEKFSGKRWTVPAKVYARPLELFVGLKLSKDDFLKELDALGYRRESLSNGPGAASVSGNNVELNTRGFQFYEGA EPAQRVRVRFSGDYVAGLTQASGADLAVARLEPLLIGGLYPAHHEDRVLIKLDQVPAYMVETLVATEDREFFNHHGVSLKSIARAFWINATAGELRQGGS TLTQQLVKNFYLTSERTISRKATEAMMAVLLELHYDKREILEAYLNEVFLGQDGQRAIHGFGLASQYFFSQPLAELKLHQIALLVGMVKGPSYYNPRRFP ERALERRNLVIDLLAEQGVVTPEEAAAAKQKPLGVTRRGSLADSSYPAFLDLVKRQLREDYREEDLTEEGLRIFTSFDPILQSKAETALSETLKRLSGRK GVDQVESAMVVSNPETGEIQALIGSRQPRFAGFNRAVDAVRPIGSLIKPAVYLTALERPSQYTLTSWVADEPFSVKGQDGQVWRPQNYDRRAHGTIYLYQ GLANSYNLSTAKLGLELGVPNVLKTLERLGVSREWPAYPSMLLGAGALSPMEVATMYQTLANGGFNTPLRGIRSVLTAEGEPLKRYPFQIQQRFDPGAIY LVQNAMQRVMREGTARSVYSQLPSSLTLAGKTGTTNDSRDSWFAGFSQDLLAVVWLGRDDNGKTPLTGATGALQVWTSFMRKADPLPLDMPMPDNVVQAW IDPHSGQGSDPSCPGAVQMPYIRGSEPAPGAACGMGAPVDSVMDWVRGWMQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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