Pseudomonas resinovorans DSM 21078, G559_RS0127065
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas resinovorans DSM 21078 G559DRAFT_scaffold00016.16, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCATTCTCTCCACACTGCCGTCGGCCGGTGTCGGCGCGCTGCTGGCGATCCTGCTCACCGGCGGGGAGTTCAGCCTGATTTCCCTGCTGGGGCTGTTCC TGCTGATCGGCGTGGTGAAGAAGAACGCCATCATGATGATCGACCTCGCCCTGCAGCTGGAGCGCCAGGAGGGCATGTCCCCGGACGAGTCCATCCGGCA GGCCTGCCTGCTGCGCCTGCGGCCGATCCTGATGACCACCATCGCCGCCATCCTCGGCGCCGTCCCGCTGCTGATTGGCGGCACCGAGGGCGCGGAGATG CGCCAGCCACTCGGCGTGGCCATCATCGGCGGCCTGGTGCTGAGCCAGTTGCTGACCCTCTATACGACCCCCGTGGTCTACCTCTACCTCGACCGTCTAC GCCATCGCTTCAACCGCTGGCGTGGCGTGCGCACTGACGCCGCTCTGGAAACACCCCTATGAACACCGCCGCCACTTCCCTGAAACCCCTGCGTCGCGCC
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| DNA Sequence for Gene |
>G559_RS0127065
ATGGCCCTGGCCCTTGCCGGCCTGCTGCTCGGCGGTTGCGCCATCGGCCCGGACTACAAGCGTCCGGAGCAGAGCGTGCCCGTGCAGTTCAAGCATGCCG AGGGCTGGTCCCTGGCCACCCCGGCCGACCTGGAGCACCGTGGCCGCTGGTGGGAGCTGTACGGCGATGCCACCCTCAACGACCTGCAGCAGCGTCTGGA AACCTCCAACCAGACCCTGGCGCAGTCCGTCGCCCAGTACCGCCAGGCCCAGGCGCTGGCCCGTGGTGCCCGCGCGTCCTTCTTCCCGTCGGTGACCGGC AATGCCGGCAAGACCCGCTCGGGCCAGGGTGGCGGCGACAGCACAGTGCGCCTGTCCGACGGCTCCACGGTCACCAGTTCCGGTGGCGGTGGCGTTTCCA AGAGCTATGACGCCAGCCTTGGCGTGAACTGGGAAATCGACCTCTGGGGCAAGCTGCGCCGCCAGCTGGAGTCCGACACCGCCAGCATGCAGGCCAGCGC CGCCGACCTCGCCGCTGCGCGCCTCAGCCTGCAATCGGAGCTGGCGCAGAACTACCTGCAACTGCGCGTACTGGATGCCCAGAAGCGCCTGCTGGATGCC ACCGTCGCCGGCTACCAGCGTGCCCTGACCCTGACCCAGAACCAGTACAAGGCCGGCATCGTCACCCGTGTCGACGTGGCCCAGGCCACCACCCAGCTGA AGAGCACCCAGGCCCAGGCCATCGACCTCAAGTACCAGCGCGCGCAACTGGAAAACGCCATTGCTGTGCTGGTGGGCCTGACGCCCGCCGAATTCAGCCT GGCCGAAGTGGACAGCGTGCCGGCGCTGCCGACGGTACCGACGCTGCTGCCCTCGCAACTGTTGGAGCGCCGCCCGGACGTGGCCTCCGCCGAACGCAAC GTGATGTCCGCGAACGCCCAGATCGGCGTGGCCAAGTCGGCTTACTTTCCCAGCCTCAGCCTGAGCGCCGCCGGTGGCTATCGCAGCGGCAGCCTGCACG ACTGGATCACCACGCCGAACCGTTTCTGGTCCATCGGCCCGGAATTCGCCATGACCCTGTTCGACGGCGGCCTGATCCGCTCCCAGGTGGCGCAGGCCGA AGCCAGCTACGACCAGACCGTGGCCGTCTATCGGCAGACCGTGCTCGACAGCTTCCGTGAAGCCGAGGACTACATGGTCCAACTCGACGTGCTGGAAGAG GAGAGTGAGGTGCAGCAGGAAGCCCTCGACGCCGCCCGCGAAGCCCTGCGCCTGATCACCAACCAGTACAAGGCTGGCACCGTGGACTACAACAGCGTCG TCACCAACCAGGCCACGGCGCTGAGCAACGAACGCACGGTGCTGACCCTGATGGGCACCCGCCTGACCACCAGCGTCCGGCTCATCGCCGCCCTGGGCGG TGGCTGGGAGCAGGGGCAGCTGGAACAGGTGGACCCGGACTCCGAAGCGACGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTCTGCATCTCCCAGGGAGAAGGATTGCTGTGGGGGCGAATTCATTGGCTATGTCTGCGTTGGCTGTTGCTAGACGGCAACCGGTGAGCGTGGGCGCCT GTAGGAGCCAGCTTGCTGGCGAAAATGTCCGCGTTCGCTAGCAAGCTAGCTCCTACAAGGGATTCCAGGGCCTTCAACGTTTTACGCAGACAAAGCCAAT TCATTCGCCAAGCGGGCCGAAGGTCCGCTCTACAGGCATCCTTTGGGGGCAGCTGCGCTGCCCTTGGCGAATGAATTCGCCCCTACAGGGGACGGCCTTC GTGCCTCGCTGATAGCCGGTTCCGCACGCGGCTCCAACTCCGGCTATACCACTGGAAAGGCCCCGCACGCGGCACCAGCCGCGGCCTCGAGAGCCTGGCG AGGAGAACTACATGCCTCAACCTGCCAGAACCGCCATTGTCACCGGGGCTTCCCGGGGAATCGGCGCCGCCATTGCGCGGCGCCTTGCCGCCGAAGGCAT
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| Amino Acid Sequence |
>RND transporter
MALALAGLLLGGCAIGPDYKRPEQSVPVQFKHAEGWSLATPADLEHRGRWWELYGDATLNDLQQRLETSNQTLAQSVAQYRQAQALARGARASFFPSVTG NAGKTRSGQGGGDSTVRLSDGSTVTSSGGGGVSKSYDASLGVNWEIDLWGKLRRQLESDTASMQASAADLAAARLSLQSELAQNYLQLRVLDAQKRLLDA TVAGYQRALTLTQNQYKAGIVTRVDVAQATTQLKSTQAQAIDLKYQRAQLENAIAVLVGLTPAEFSLAEVDSVPALPTVPTLLPSQLLERRPDVASAERN VMSANAQIGVAKSAYFPSLSLSAAGGYRSGSLHDWITTPNRFWSIGPEFAMTLFDGGLIRSQVAQAEASYDQTVAVYRQTVLDSFREAEDYMVQLDVLEE ESEVQQEALDAAREALRLITNQYKAGTVDYNSVVTNQATALSNERTVLTLMGTRLTTSVRLIAALGGGWEQGQLEQVDPDSEATP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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