Strain | Pseudomonas sp. P818 P818-scaffold21, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCCGGACTGGCTGACCCGGCCGCGCAGTTCCAGGCGCAGATCCTGCGGTGCCTGCCGGTCGCTCAGTGGCAGATGAAACGGCAGCGCTTCGCCGTTGCCA CGCAGGTGCAGCTGGGCGAGCAGGGCGCGCGGTCTGCCACGCATATCCACGCCCAACAGCGCCAGATCGACATCGGCGCCAGCGGCGACGCCGAGCAGCT CTCCGCGCAGTCCGGGGCCCTGAAGCGTAGGCGCATTGATTTCGATCTCTGTCGGCGCGGGCGTGGCAGGCGCTGTGGTCGCAGTGGGTTCACTGGCACA GGCGGCTAGCAGGCCGCTCAATGCCAGTGGCAGGAAGAACAGATATCGGTTCATGGCAGGTTCTGCTTTTTAGAGGTGTATGTGCATAGCTTAATTTGTC TTGCGGCCTCTAAGCAGGGCATCTCAAGGCTGCTTACATTTTTCAATGGCGTGCTATGCGCTACCATGGCGACTTTGCCGCCAATCGGTCTGCGCCTGCC
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DNA Sequence for Gene |
>P818_RS0120160
ATGCATTGTCCCTTCTGCGCCGCCAACGACACCAAGGTCATCGATTCCCGCCTGGTCGCCGAGGGCGATCAGGTGCGCCGCCGCCGCGAATGCGTGGCCT GTGGTGAACGTTTCACCACCTTCGAAACCGCCGAGCTGGTGATGCCGCGCCTGATCAAGCAGGACGGCAGCCGCCAGCCCTTCGATGAAGAGAAGCTGCG TGCCGGCATGCAGCGCGCACTGGAGAAGCGCCCGGTAAGCGTCGAGCGCCTGGAAGAGGCCATCGCCCGCATCAAGCAGCAACTGCGTGCCACCGGCGAG CGCGAGGTGAAATCGCTGGTGCTGGGTGAGCTGGTGATGACCGAGCTGAGCAAACTCGATGAGGTGGCCTACATTCGTTTCGCCTCGGTCTATCGGCGCT TCCAGGACCTCAACGAATTCCGCGAAGAGATCGAACGTCTGGCCCGTGAGCCGTCGAAAAGCCGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGAGCGCGACCACTTCTTCATGGCGCGCGCCCTCAAGCTGGCGCGCAAAGGCCTTTACTCCACCCATCCGAACCCGCGTGTCGGCTGCGTCATCGTGCG TGACGGCGAGATCGTCGGCGAGGGCTGGCATGCCCGTGCCGGCGAGCCGCATGCCGAGGTGCATGCCCTGCGCCAGGCCGGTGAGCGCGCGCGTGGTGCC ACCGCCTACGTCACCCTGGAACCCTGCAGCCACCACGGGCGTACGCCGCCCTGCGCCGATGCGCTGGTCGCCGCCGGGGTCGGCCGGGTGGTCGCGGCGA TGCAGGATCCCAACCCGCAGGTTGCCGGGCGTGGCCTGTTGCGCCTGGCCAACGCCGGGGTCGAAGTGCTGTCCGGTGTGCTGGAGGCCGAGGCACGGGC GCTCAACGTTGGCTTCATCAAGCGCATGGAAAGCGGCCTGCCATTCGTTCGGGTCAAGTCGGCGATGAGTCTGGATGGCCGCACGGCCATGGCCAGTGGC
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Amino Acid Sequence |
>NrdR family transcriptional regulator
MHCPFCAANDTKVIDSRLVAEGDQVRRRRECVACGERFTTFETAELVMPRLIKQDGSRQPFDEEKLRAGMQRALEKRPVSVERLEEAIARIKQQLRATGE REVKSLVLGELVMTELSKLDEVAYIRFASVYRRFQDLNEFREEIERLAREPSKSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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