Strain | Pseudomonas sp. P818 P818-scaffold3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AACGCCGAGCTGCACGCGAAGAAACTCAACATCATCACCGGCCGCAACGAAGTGGACGCCACCCGGCAGGTCGGCACCGAGCAGGGCGTGGGCGTGAAAC TGGCCGATCGATGCCAATGGCAAGCTGAGCCTGAACCGTGTGGACCATCGACCTCAACGCTGACACTTACGCAGGCCGTGCGGGAAAGCCTGGCCGCCAG CCAGCGCCTGACCGTTCGAGGGCCATCGACAGCTCGGCACTGGGCGGCATGTACGCCGGCGCCATTCGCCTGGTCGGCACCGAGCAGGGCGTGGGCGTGA AACTGGCCGGCGACATGGCCGCCAGTGCCGGGGATATCCAGATCGATGCCAATGGCAAGCTGAGCCTGAACCGTGTGGCCGCCAGTGGTGATGTTGCGCT CAAGGCCAGCACCATCGACCTCAACGCTGACACTTACGCAGGCCGCAACGCCACGCTCGAAGCGCAGCAGGTCGAAGTGCGGGAAAGCCTGGCCGCCAGC
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DNA Sequence for Gene |
>P818_RS0101865
CAGCGCCTGACCGTGCAGGCTGAGCAACTGAACAACGCCGGCATCATCGAGGCAGGTGTGCGCGCTAATGGCAGTGTCAGCAGCGCAGGCCATCTGCAGC TCGATGGCGGCAAGGTGCGTAATGCCGGAGAGATGACCAGCCATGGCAGCATGGCGACTGACCTGCAAACGCTGGACAACGCGGGCGGCAAGATCGCCAC TGCCGGCAGCGCCACGCTCAAGGCTGATCAGCTCGACAACCGCGAAGGCGAGATCCTCGCTCAGGGTAATCTGACCCTCGACGCTGCAAGGCTGGACAAC CGCGCCGGTAGCGCGCTGGCTGGCCAGGCCTTGGCCATCGAGGCCGAGGCAGTGGATAACCGCGCCGGTACCCTGGCAGCCGGTGGCGCAATCGAGGCGC GTGTCACCAACGCCCTGAACAACGACGGCGGGCTGGTGGAAGCTGGCGGCCGTCTCGATGTCGAAGCCGATAGCCTGAGCAATACCGATGGTCGCCTGCG TGCTCTGGGCAGTGGCGGTGAAAGTCGCTTCGTCATCGGTTCGCGCCTGAACAACGACGAGGGCGTCCTCGAAGTAGCCAGCGCGGTGCTGTCCTTCGAC ACCGAGTCGCTCAGCAACCAGGGCGGTGTCGTGCGTCACCTCGGCAGCGGCGGGCTGGGCCTCGACATGCAACTGCTCGGCCAGGCCGGCGGCGAATTCA TCACCAACAGCGCGGTGAGCCTGAGTGCCGAGGAATGGGTCAACCGCAGCCTGTTGCAGGCCGCGTCCATCGAACTCGATGTACAGCGTCTCACCCAGAC CGCGACCGGTGGCCTGCTCTCCGTGGCTGGCCTCGCGCTCCAGGCAGATAGCTGGACCAACGATGGCCGGATCGAGACCGATGGTGACCTGAGCCTGATC CTCAGCGGCAATTACCGTGGCAACGGTACGCTGATCAGCAAAGGGCATCTCGAGCTGGAGGCGGACAACATCCAGCTGGGCAGCGATGCCCGGCTTCGCA GCGCAGGTCATGGCCGCCTGGTCGCGCTGGGCGAGCTGGTCAATAACGGACAGCTGACTGCTGGCACCTGGCTAAACCTGGCGGCCAGCGCGCTGAAGAA CAAGGGCACTGTGGGTGCTGGCGGTGAGTTGCTGCTGGTAGCGCAGGACATTGGCAACGAAGACGGGCTGATCTTCAGCGGCGAAGACATGCGCCTGTTC GGGCAGCGTATCGAGAACCGTCGGGGTGACCTCTACAGCCTTGGCAACCTGTTGATCGCCGCCGACGCACAAGGCGGCATGGCCGAGCGCTTGAGCAACC TGTCCGGCACCGTCGAGTCGGCCGGTACCCTGGCCGTTGCCGCTCGGCAGATCGAAAATGCCCGGGAAAGCTTCGAGATCGCCTCGCGCAAGTACTCGGC ACGTCTGGTACATGTGGGCTGCATCGACTGCAGTGGCACCAATGAAGACGCGCTGTTTCGTCTCGATGAATATGATCGTACGGAGGTCGTGAGCGGCAGC ACCTCGGCCAACATGCTGGCTGCCGGTGATATGCACCTGTCCAGCGAGACGCTGGACAATCTCTATAGCCAGATCGCCGCCGGCGGTGACCTGCACATCG ACACCGGGCGACTGACCAACCAGGGCGCGCAGACCGGTGAAGTGTTCCAGTCGCGGGTCTTGCAGTCGCACCGGATACGCGCCAACCGCGTGCCGCTCCA GATCGCCGACGCCAACAGATTCAGCGCGCGCAACTGGCACGGCAGCTCAAGTTACAACCCAACCAACCTCCAGGGCGAGCTCAACAATTTCTTCGATTGG CACGTTTCTCGGGTGCTCAGCACCAGCGAGCCGGTGCTGAGCAACATCGAGTATCACCACGCAACCATTCAGGCAGCGGGTGACCTGCGTATCGAGGCCG ATGAGCAGATCAACAACAGCCTTATCCGCCCGTCATTCAGCTACGTAGCCGGCGGCAGCCGTGACGTTGATACCAGCGTACCGGGTGATGGTATTTCCAC GACCATCACCCTCAATCCGCAGCTGCCGCCCGACCTGCAGCAGAAGGCCGTCGACCCGCTGTCGCTGCCCGGCTTCTCCCTGCCTAGCGGGCAGAACGGC CTGTTCAGCCTGAACACCAACCCGGGCCATCGCTACCTGATCGAAACCAACCCGGCCTTCGCCAACCTGGGCAACTTCCTCAACTCCGACTACATGCTCG GCCTGCTGGGCTTCGACCCGGACGAGATGCAGCGCCGCCTGGGGGACGGCCTCTACGAGCAGCACCTGGTGCGTGAAGCGGTGCGTGCGCGTACCGGCCA GCGCTACCTGGCAGGGCTGGACAGCGACGAGGCGCAGTTCAGGTACTTGATGGACAACGCCATCGCCAGCAAGGAGGCATTGAACCTCAGCCTGGGTATT AGCTTGAGCGCCGAACAGATTGCGGCCCTGACCCACGACATCGTGTGGATGGAAGAGCGAGAGGTGCAGGGGCATAAGGTGCTGGTACCGGTGCTCTACC TGGCGCAGGCCGAAGGTCGTCTGGCACCAAGCGGCGCGCTGATCCAGGGGCGTGACGTGGCGCTGATCTCCGGCGGCGACCTGAGCAACCAGGGCACCCT GCGTGCCAGCGACAACCTCAGTGTCACCGCTGCCAACATTGGCAACAGCGGCCTGATGCAGGCCAACCAGCGCCTGCAGCTGCTGGCCACCGACAGCATT CGTAATGCTCAGGGCGGGATCATCGCGGGCAATGACGTCAGCCTGTTTGCGGTCAATGACATCAGCAACGAGCGCAGCGTCACCACGCACGAATCCTCCA GTGGCGATCGTTATCAGCACCGCCGCGACTTCATCGACAGCGCGGCGCGCATCGAAGCGGGCAACGACCTGCAGGTCAGTGCCGGCAACGACATCCGCAA CATCGGTGGCGCCATCAGCGCGGGCGGTGATGCCAGCCTGCAGGCGGGCAATGACCTGATCCTCGCCTCGGCCGAGACGGTCGACGAGCAAAAACGCCGT GACCGCAAGGGCCATACCTATCGAACCGACATCACCCAGTACGGCAGCGACGTGCAGGTGGGCGGTGACCTGACGGCTGTTGCTGGTCGCGACCTGCTGG TGGTCGGCAGCACCGTCAAGGCCGGTGGCGATATCGGCCTGGGCGCAGGCGGCGACATGACCATCGCCTCGGCAGCGAACGAGAGCAGCTTCGACCACTA CCGCAAGAGCGGTGGTAAGAAGGTCGTCGCCCAGGAGCAGCACGTCAGGCAGGTTGCGTCGGTCATCGAGGCCGGTGGCAATCTCGACATGCGCACCGAT GGCAATCTGCTGCTTGTCGCCAGCCAGCTCAAGGCCGGTAACGAAGCCTATCTGTACGCCGGCGAACAGCTTGCCCTGCTGGCGGCGCAGAACAGCGACT ACTCGCTGTACGACAAGAAGAAAAAAGGCGGCTGGGGCAGCAAGGAAACCCAGCGCGACGAAGTCACCACCGTGCGCAACGTCGGCAGCTCCATCACCAC CGGCGGCGATCTGATCCTGGTCAGCGAAGGCGACCAGCTCTACCAGAAAGCGCGCCTGGAAAGCGGCAACGACCTGATCCTCGACAGCGGCGGCAGCATC ACCTTCGAAGCGGTCAAGGATCTGGATCAGGAGAGCCACGAGAAGAGCAGCAACAGCCTGGCCTGGACTTCAGCCAAGGGCAAGGGCAGCACGGATGAAA CCCTCTACCAGAGCCAGTTGATCGCCAAGGGCGACCTGGTGATACAGGCCGTGGACGGTCTGAAGATCGACGTCAAGGAGGTCAACCAGCAGAGCGTCAG CCAGACCATCGATGCCATGGTCAAGGCCGATCCCGAGCTGGCCTGGCTCAAGGAGATGGAGCAGCGCGGCGATGTCGATTGGCGGCAGGTGAAGGAGATC CATGACTCCTTCAAGTACAGCCATTCGGGGTTGGGCGGGGCTGCGGCGATGGTGATTGCTATCGTGGTGGCGTACTTCACGGCGGGGGCAGCCAGTGGGC TGGTAGCTGGAGCAGCAGGGGCCGGAGGGGCGTCCACTGCAGCAGGCGCAGCATGGGCGACAACCGTAACAACGGCTGCCGGTACGACCGCGGCAGGTTG GGCTAACGTGGCTGCTACTGCAGTTTTGACCTCGGCAGCTAGCGGGGCTGCCGTTAGTACCATCAACAACCGCGGCAATCTTAGTGCAGTGCTCAAAGAC GTTACGTCGGAGCAGGCATTGAAGGGGTACGCCGTGGGTGCGGTAACGGCTGGGCTCACTGCTGGCGTTTACGACAAGTGGACCGGCACAGAAACGGCCA CCAACACTGCTGGCGCCGCTACCGGGAACAGTGGTGCGTTGGCCAATAGTGGTGCCGTAGCAACCGGCGGTGGCCTTTCCTCGTGGTCGGGTATCGGGCA GTTCGCAGCGAACCAGGCGCTTCAAAACAGTACATCCGCAGTGTTGAACAAAGCGTTGGGGCAGGAAGGCAGCCTAGGCGATGCGTTGCAGATGACACTA GCCAACACCTTCATGGCTGCGGGCTTCAACTGGGTTGGTGATATTACTCAGCCAGGCGCCAAGCTGGAGCTGAAAGATGGCAGCCTCGTCAAAGCAGGCC TTCATGCTGTGATGGGCGGTCTCGCCGCTGAGGCCATGGGCGGTGACTTCAAGACAGGAGCCTTGGCAGCCGGTGTGAACGAGCTGCTGGTTTCTGAGTT GGATGCCCAGTACAAGAAAATGGGCATTGAGGACAGAAGCGCGCTGCTGGTGATGAACTCGCAGGTGATTGGAGTGCTGGCTGCTGCTGCACAGGGAGGG GAGGAGAAGGCGCTGCAGGTTGGGGCGCAGGTGGCGGGGAATGCTACGCAGTACAACTTCATGGGTCATCAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GAACTGGATGAGTTTGTTGCAGACGCTCAAGTGTGTGAAGCAAGAGGAAACTGTGACGAGGTAAGGCAAAAATTCAGGGACATTTCTCTCGGTGGCGATG ATGCGTTAGGTGCCCTCTGTGCTACTGATCCGGCTAGTTGTATTGAGTTGTATGGTGATCTGGCTCATGATCGCCTAAGTTTGCAGGAGAGAATCAGCAA ACTCTATTTCGACGACAGTATTCCCTCGGTACTCAAACGTGATCTGCATGTTTATCAAATGCAGAATATGAGTGCGGTTGGTACACTGACGAAGGCACAG GTGCAGATCGGTCTTGAGAACCAAGGTCTCTCTAGTGATAGCGCTCAGCTAGGCGCTATGGTGGCTGCGGCAGCAGCGTCTGGCGGCCTAGTAGGTCGAA CTGGTGGGGCAAACGGTGCATCCAGTGCGGCTACACCGAATGGGGCGATTTGGTCGTCGACTAAAAGCAAGTCAGCAGTTGAAAATGCCTTGGGACATTG
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Amino Acid Sequence |
>hypothetical protein
QRLTVQAEQLNNAGIIEAGVRANGSVSSAGHLQLDGGKVRNAGEMTSHGSMATDLQTLDNAGGKIATAGSATLKADQLDNREGEILAQGNLTLDAARLDN RAGSALAGQALAIEAEAVDNRAGTLAAGGAIEARVTNALNNDGGLVEAGGRLDVEADSLSNTDGRLRALGSGGESRFVIGSRLNNDEGVLEVASAVLSFD TESLSNQGGVVRHLGSGGLGLDMQLLGQAGGEFITNSAVSLSAEEWVNRSLLQAASIELDVQRLTQTATGGLLSVAGLALQADSWTNDGRIETDGDLSLI LSGNYRGNGTLISKGHLELEADNIQLGSDARLRSAGHGRLVALGELVNNGQLTAGTWLNLAASALKNKGTVGAGGELLLVAQDIGNEDGLIFSGEDMRLF GQRIENRRGDLYSLGNLLIAADAQGGMAERLSNLSGTVESAGTLAVAARQIENARESFEIASRKYSARLVHVGCIDCSGTNEDALFRLDEYDRTEVVSGS TSANMLAAGDMHLSSETLDNLYSQIAAGGDLHIDTGRLTNQGAQTGEVFQSRVLQSHRIRANRVPLQIADANRFSARNWHGSSSYNPTNLQGELNNFFDW HVSRVLSTSEPVLSNIEYHHATIQAAGDLRIEADEQINNSLIRPSFSYVAGGSRDVDTSVPGDGISTTITLNPQLPPDLQQKAVDPLSLPGFSLPSGQNG LFSLNTNPGHRYLIETNPAFANLGNFLNSDYMLGLLGFDPDEMQRRLGDGLYEQHLVREAVRARTGQRYLAGLDSDEAQFRYLMDNAIASKEALNLSLGI SLSAEQIAALTHDIVWMEEREVQGHKVLVPVLYLAQAEGRLAPSGALIQGRDVALISGGDLSNQGTLRASDNLSVTAANIGNSGLMQANQRLQLLATDSI RNAQGGIIAGNDVSLFAVNDISNERSVTTHESSSGDRYQHRRDFIDSAARIEAGNDLQVSAGNDIRNIGGAISAGGDASLQAGNDLILASAETVDEQKRR DRKGHTYRTDITQYGSDVQVGGDLTAVAGRDLLVVGSTVKAGGDIGLGAGGDMTIASAANESSFDHYRKSGGKKVVAQEQHVRQVASVIEAGGNLDMRTD GNLLLVASQLKAGNEAYLYAGEQLALLAAQNSDYSLYDKKKKGGWGSKETQRDEVTTVRNVGSSITTGGDLILVSEGDQLYQKARLESGNDLILDSGGSI TFEAVKDLDQESHEKSSNSLAWTSAKGKGSTDETLYQSQLIAKGDLVIQAVDGLKIDVKEVNQQSVSQTIDAMVKADPELAWLKEMEQRGDVDWRQVKEI HDSFKYSHSGLGGAAAMVIAIVVAYFTAGAASGLVAGAAGAGGASTAAGAAWATTVTTAAGTTAAGWANVAATAVLTSAASGAAVSTINNRGNLSAVLKD VTSEQALKGYAVGAVTAGLTAGVYDKWTGTETATNTAGAATGNSGALANSGAVATGGGLSSWSGIGQFAANQALQNSTSAVLNKALGQEGSLGDALQMTL ANTFMAAGFNWVGDITQPGAKLELKDGSLVKAGLHAVMGGLAAEAMGGDFKTGALAAGVNELLVSELDAQYKKMGIEDRSALLVMNSQVIGVLAAAAQGG EEKALQVGAQVAGNATQYNFMGHQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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