Pseudomonas putida GB-1, PputGB1_3913 (flhA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida GB-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGCAGGCCGATGTGATCATCACCAACCCGACGCACTATGCGGTAGCGTTGCAGTACGACCCGGAGAAGGGCGGAGCGGCGCCGCTGCTGCTGGCCAAGGG TAGCGACTTCATGGCTTTGAAGATTCGTGAAATCGGCGTGGAGCACAAGATCCAGATCCTCGAGTCGCCAGCGCTGGCGCGGGCGATTTACTACTCCACG GAGGTTGAACAGGAAATCCCTGCCGGCCTGTACCTGGCCGTGGCTCAAGTGCTGGCCTATGTGTTCCAGATCCGTCAGTACCGCTCCGGCAAGGGCAAGC GCCCTGAGCCGTTGAAAGACGACCTGCCGATCCCGCCGGACCTGCGCCGCGACAGCTGATGCGCCACGCGGGCGGCGCTCGATCCCACAGGCGTAAAAAA TCTTGAGGCGACCACTCACCGAGCAAAGTTGGAAGGCTTCTTGCAGAGCCTCGCCCAGGCGCCCCCTGGGCGTCAAAGTTTTGCATCAAGAGGACTCGCG
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| DNA Sequence for Gene |
>PputGB1_3913
|flhA
GTGGATCGCACTCAGTTAATCAGCAACGCCCGTAACAACCTGGCCGGGCTCGGCCGGGGCAACCTGGGTGTGCCGCTGCTGCTGCTGGTGATGTTGGCAA TGATGATGTTGCCGATACCGCCGTTCCTGCTCGACGTGTTCTTCACCTTCAACATCGCCTTGTCGATCGTGGTGCTGCTGGTTTGCGTGTACGCCCTGCG CCCGCTCGACTTCGCAGCCTTTCCCACCATTCTGCTGGTGGCCACGCTTTTACGCCTGGCGCTTAACGTGGCTTCCACCCGCGTGGTCATGCTGCACGGT CAGGAAGGCCATGGCGCCGCCGGCAAGGTGATCCAGGCCTTCGGTGAAGTGGTGATCGGCGGTAACTACGTGGTCGGTGGCGTGGTGTTCGCCATCCTCA TGATCATCAACTTCGTGGTGGTGACCAAGGGTGCCGGGCGCATCTCGGAAGTGAGTGCGCGTTTCACCCTGGACGCCATGCCCGGCAAGCAGATGGCCAT CGACGCCGACCTCAACGCCGGCCTGATCGACCAGGCCCAGGCCAAGCACCGCCGTGCCGAAGTGGCGCAGGAGGCCGAGTTCTACGGTTCGATGGACGGC GCCAGCAAGTTCGTGCGCGGCGACGCCATCGCCGGCTTGCTGATCCTGTTCATCAACCTGATCGGTGGCATGCTGATCGGTATGCTGCAGCACGGCATGA GCTTCGGCGATGCCGGCAAGGTGTACGCGCTTTTGACCATTGGTGACGGTTTGGTGGCGCAATTGCCATCACTGTTGCTGTCCACCGCCGCTGCGATCAT GGTCACCCGCGCCTCGGGCTCCGAGGACATGGGCAAGCTGATCAACCGGCAGATGTTCGATTCGCCCAAGGCGCTGGCGGTGTCTGGCGCACTGATGATC GTCATGGGGCTGGTGCCAGGCATGCCGCATGTGGCGTTCCTGAGCCTCGGCCTGCTGGCCGGTGGCGGCGCCTACCTGGTGTGGAAGAAGCAGCAGCAGG TCAAGGCCAAGGCCCAGGAAGAGGCGCAGCGCCAGCAGGACCTGCTGCCGTCGCCGCAGCGTGCGCTGGAAACCAAGGAGCTGGGCTGGGACGACGTCAC GCCGATCGACATGATCGGCCTGGAAGTCGGCTATCGGCTGATTCCGCTGGTCGATCGCAACCAGGGCGGCCAGTTGCTGGCGCGAATCAAGGGCGTGCGC AAGAAGCTGTCGCAGGACCTGGGCTTTCTCATGCCTACCGTGCACATTCGTGACAACCTCGACCTGCAACCCAGTGCCTATCGCCTGACCCTGATGGGGG TGATCCTGGCCGAGGCCGAGATCTACCCGGACCGCGAACTGGCGATCAACCCAGGGCAAGTGTTCGGCACCCTCAACGGTATTGCTGCGCGCGACCCGGC GTTTGGCCTGGAAGCCGTGTGGATTGACGTTGGGCAGCGCTCGCAGGCGCAGTCGCTGGGCTACACCGTGGTCGACGCAAGCACCGTGGTGGCCACTCAC CTCAACCAGATCTTGCAGAAGCATTGCCACGAGCTGATCGGCCACGAAGAGGTTCAGCAGTTGCTGCAGGTGCTGGCCAAAGCATCGCCTAAACTGGCAG AAGAGCTGGTGCCGGGTGTCATTTCCTTGTCGGGGCTGCTCAAGGTGCTGCAAGCGCTGTTGTCGGAACAGGTGCCAGTGCGCGATATTCGCAGTATTGC CGAGGCCATCGCGAACAACGCCGGCAAGAGTCAAGATACCGCCGCGCTGGTGGCGGTGGTGCGCGTCGGATTGTGTCGCGCCATCGTGCAAAGCATTGTC GGCGTTGAGTCGGAGCTGCCAGTGATTACCTTGGAGCCAAGGTTGGAACAGATTTTGCTCAATAGTCTGCAAAGGGCCGGGCAGGGTCAGGAAGAGGGTG TTCTTCTGGAACCGAGCATGGCCGAGAAGCTGCAACGTTCGCTGATCGAAGCGGCCCAGCGCCAGGAAATGCAGGGCCAGCCGGCCATCCTGCTGGTCGC CGGCCCGATCCGCGCCATGCTGTCGCGTTTCGGTCGCCTGGCTGTACCGAATTTGCATGTTCTGGCGTATCAGGAAATACCGGACAACAAGCAAGTCACC ATCGTTGCCACCGTGGGCCCTAACGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAGTGGATAATGCAAGTTAAGCGATTTTTCGCCGCCGATATGCGTCAGGCCATGAAGCTGGTCCGTGACGAGCTGGGCGCCGATGCCGCGATCATAGG CAACCGCCGCATTGCCGGTGGTGTCGAACTGACGGCCGCGCTGGACTACAAGCTGTCCGCCCTGGCCCCGCGCGTGCCCAACGCCGAGCTGGAAGAAGAG CTGCGCAAGACCCATACGCGCATCGCCACTGCCCAGGCCGAGCTGGACCACCGTCAGGACAGCAGCGACAACAACCGCCAATTGTTCGCCGGGCAGTCGT TGACCGCTGCCGAACCGTTGATCGAGCCGCACGTCGATACCCCTGAGGTTGCCGCTGCGCCGGCTGCCGCACCGGTCGACCCGCGCCTGTTCGATGCCAT GCGCTCCGAGCTGTCGGGCCTGCGCGAGCTGCTGGAAGTGCAGCTCGGCTCGCTGGCCTGGACCCAGTTGCAGGGCAGCAAGCCGCAGCAGGCCAACCTT
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRTQLISNARNNLAGLGRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVATLLRLALNVASTRVVMLHG QEGHGAAGKVIQAFGEVVIGGNYVVGGVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKHRRAEVAQEAEFYGSMDG ASKFVRGDAIAGLLILFINLIGGMLIGMLQHGMSFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGALMI VMGLVPGMPHVAFLSLGLLAGGGAYLVWKKQQQVKAKAQEEAQRQQDLLPSPQRALETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDASTVVATH LNQILQKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVISLSGLLKVLQALLSEQVPVRDIRSIAEAIANNAGKSQDTAALVAVVRVGLCRAIVQSIV GVESELPVITLEPRLEQILLNSLQRAGQGQEEGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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