Pseudomonas aeruginosa PAO1, PA0716.2 (xisF4)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PAO1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACCAAGGAAGTTAAGGACAATCGTCGTCTATGAGATTACCGTATCCTTGTCAGCTTCATTTCTTGCCTTCCATCCGTAGGGCATACCATCGCAATGCTA CTTTTCTAGTGATCGCTATCCCGCGTTTTGATTGGACAAGTTTCGATTGGCTTCGTCATAGTCGGGGCTAGTTTGGCCGACTTCTGGGGCGATGGAACCG CTTGCAATCCATAATGCGTAATTAGGGAAAATTTTTACTAGGACGTCGATTTCTTCCGTGCTCACGCGAATCGCGCCTTTGCTGACGCTTTTCCATCTCT CGTAATCGCCCCCGTGAAGGCTGACCTTTTTGGGGCCGATTTTCTTGATTAATAGTCTTGCTCTATCGGCTGACGTGCTCATATAGAAATTTATTCCGGG GAAATAGTTGCCCTGACGTGGCTTTGGGGAAATAATTTCTCCAGGGTAATTATTTCTCTAGCTGCGTATGGCTAATGCCACGAATAGTGACGGAATGAGC
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| DNA Sequence for Gene |
>PA0716.2
|xisF4
ATGGAACTGGAAGAGCTTAGCCCCAGTGCCCTGATAGGGCCGCAACAGGATGTGGAGTCCATCGAACGGTGGGCGGAGCGCAACGGCATCAGCTACGGCA CCGCTCGCGCCTGGGTTTACCGGGGTGTGCTGCCGTCGGTGAAGCTGGGGAAGCTGCGCATGGTGAATAGCGCGCTGCTGCGTACCTGGCTGTTGGAACA GGAATGGAGTGCC
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGATATGCGCTACCTCGTAGAGATTTGCACCTTCCACGGCCCGACACGGCAACGTCGCTGGCATCGCGTCCATCAGGGCGGTTCCCGCGTGGAATGCCAA CGCTGGGTCGAAGAGTTGGTGGCTGTCTTCCCGACTGAAGAAGAAGCTCGCCGCTCCTTCGGCCTGACCCGCGAACGCGCTCGGCAGGTGTACCGCATCC GTGGGGTGAGGGCATGAACCATGGCCGCCAGTCCCTACTACCTACGCCAAACCCACGCCCCGGACTGCGCCTGCTCTGTGTGCTGGTCCGCAAGGCAGGT CATCCCATTGCACAGCCCGTCGCCGTGTCCAGACTGTCGGCCCCCTGGGCTGCCCTATCTGGAAGGTGGCCGCTGGCTCTGCCGTCCCCGTTCCTTCTGC GCGAAACACGACCCGTCCCGGCGTCCGCCGAAGTACTGGCACGTTGTGTACGACAGCGGGAAGCCCACGCCCTTTGTGCCCGTGCGCGAAGCATTCCAAC
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| Amino Acid Sequence |
>Pf4 prophage excisionase, XisF4
MELEELSPSALIGPQQDVESIERWAERNGISYGTARAWVYRGVLPSVKLGKLRMVNSALLRTWLLEQEWSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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