Pseudomonas putida GB-1, PputGB1_3328
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida GB-1 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGTTTCACGCCGCGGGCGGCCAGTTGCTGTTCCAGCCAGCCTTCCTCGATCACCCGGCCGGGGATGCCGCCGAACACCGGCGCCCCGCCCTGGGTGAAGG CGACGATGGCAATGCGCACCGCCGCCGGTGGCTCGGCTGCCAGCGCAGCCAGGCTGAGGAACAGGCCGCCCAACAGAGCAAGGGCATGACGCCAGGGATT GTTCATGTGCAGCTCCAGGCAAAGGTTCTACAGGCCAGGAGCGAAATGCATGCCAGCCCTTCGAAAATTGGCTGCAGACCATGCGTGGTGGGGCTTTCAG CCAGGGTTAGGCTGCGTGCGGCGGGCCGGGCCTGCTGGCCGGCGGGCAGGCGAGTGCTGGCGGGTTGCTGCTGTGGCAGCAATGGGCTGCTGAAAAATCG AATATTTCTAATTCGAATATATAAATATTAATTAATAATTTTTTGATCTAATTTGTTTCATGCACTATTGGCCTGCGCGTCAACTGCCAGGAATGCCCCT
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| DNA Sequence for Gene |
>PputGB1_3328
ATGTCGCTGATCACCCACCCCAATGCCCGCGAGCTGACCAAGTCGGTACGTGCCACCGTGCTCGTGTTCAAGGACCCGCGCTCCCAGGAGCTGCTCAGCC GCATCGAGCGCCTGGCGCCCAGCGAGGCCAACACCCTGATCATCGGCGAAACCGGCACCGGCAAAGAGCTGGTCGCCCGTCACATCCACCACCTAAGCCG CCGCGGGCGTGAGCCATTCGTGGCGGTTAACTGCGGTGCCTTTGCCGAAACCCTGGTGGAAAGCGAGCTGTTCGGCCACGAAAAAGGCGCGTTCACCGGC GCCACCAGCAACAAGGCCGGCTGGTTCGAAGCAGCCAACGGCGGCACGCTGTTCCTCGATGAAATTGGCGACTTGCCGCTGAACATGCAGGTGAAGTTGT TGCGGGTGCTGCAGGAGCGTGAAGTGGTGCGCCTGGGCTCACGCACGCCGATCCCGATCAACGTGCGGCTGGTGGCAGCGACCAACGTGAACCTGGCTGA TGCAGTGGTGGCGGGGCATTTTCGTGAAGACCTGTTCTACCGCCTGCATGTCGCCACGATTCGCTTGCCGCCGCTGCGAGAGCGACCGGGGGACATCCTG CCGCTCGCGGAATTCTTCATCGAGGAGCATTGCCGACGCCTGGGTTATGAGCGTGCCTCGTTGAGCCCGGATGCCGAACGCAAATTGCTGGCGCATAGCT GGCCGGGCAACATCCGCGAGCTGGAAAACGCCATTCACCATGCGTTGCTGGTGTGCCGGTATCAGGTGGTGGCACCGGCGGACCTGCACCTGGTCGATAT GCGGCCACAGGTAGCGGCGCCGGTTGCACATGCCTACTTGCCGACAGCCAGCGCGGCACCACCTGACCTGGAAAGTGCGTTGCTGGCGTTGTTCGAGCAG AATGTGCCGAACCTGTATGAGCATATCGAGGAGACAGTGTTCAGAGCGGCGTATCGATACTGCCACGGCAACCAGTTGCAGACGGGGCGCTTGCTGAACA TCAGCCGTAACATTGTGCGGGCGCGGCTGGAAAAGATTGGCGAACTGTCGAAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGCCTGTGTTGGGGCTGCCGCGCACTTATCGCGGGCAAGCCCGCTCCCGCAATTTCGGCGGCGTACCCAGCTACCAGCGATAGGTCAGGTCGGCGGTT ACGGTGCGCCCCGTTCCCAACAGGCAGGCTACGGTGGCGAAGCAGCCGGCCACGTAGTACTTGTCGGTCAGGTTTTTCACATTGAGCTGCGCCGACAAGC CCTGCAGGCCGTTGTTGGCCTTGCCGAAGTCGTAAGACAGCATGGCATCGACCAAGGTGTAGCCAGGCACTTCGAAAGTGTTCTGCGCATCGCCAGAGGT GGCGCCGGTGTAGCGCACGCCAAGGCCGCCGCCAAGCCCGGCCAATGGCCCGCCCTGCAGGGTGTAGTCGACCCACAGCGAGGCCAGATGACGTGGGACC CGCACCGGTGCATTTCCCTTGTTGCTGACGCCCAGCGCGTTCGGGTTGTCCTTGGTTACCTCGACATCGTTGTAGGTATACGCGGTGATCAGGTTCAGCC
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| Amino Acid Sequence |
>response regulator receiver protein
MSLITHPNARELTKSVRATVLVFKDPRSQELLSRIERLAPSEANTLIIGETGTGKELVARHIHHLSRRGREPFVAVNCGAFAETLVESELFGHEKGAFTG ATSNKAGWFEAANGGTLFLDEIGDLPLNMQVKLLRVLQEREVVRLGSRTPIPINVRLVAATNVNLADAVVAGHFREDLFYRLHVATIRLPPLRERPGDIL PLAEFFIEEHCRRLGYERASLSPDAERKLLAHSWPGNIRELENAIHHALLVCRYQVVAPADLHLVDMRPQVAAPVAHAYLPTASAAPPDLESALLALFEQ NVPNLYEHIEETVFRAAYRYCHGNQLQTGRLLNISRNIVRARLEKIGELSKA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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